STRINGSTRING
LOC108889232 LOC108889232 ENSLCAP00010004708 ENSLCAP00010004708 nprl3 nprl3 dctn5 dctn5 sema3c sema3c ENSLCAP00010001592 ENSLCAP00010001592 CPE CPE ENSLCAP00010058043 ENSLCAP00010058043 greb1 greb1 sall4 sall4 ENSLCAP00010052980 ENSLCAP00010052980 sav1 sav1 PTK7 PTK7 tmem65 tmem65 ccn1 ccn1 Cntrl Cntrl ENSLCAP00010052259 ENSLCAP00010052259 HAND1 HAND1 mstn mstn EDNRA EDNRA ENSLCAP00010047727 ENSLCAP00010047727 LOC108886611 LOC108886611 zmpste24 zmpste24 ENSLCAP00010043120 ENSLCAP00010043120 LOC108876301 LOC108876301 ENSLCAP00010041994 ENSLCAP00010041994 Sfrp2 Sfrp2 TNNC1 TNNC1 ENSLCAP00010041660 ENSLCAP00010041660 ENSLCAP00010041081 ENSLCAP00010041081 ENSLCAP00010039640 ENSLCAP00010039640 ENSLCAP00010039564 ENSLCAP00010039564 ENSLCAP00010038275 ENSLCAP00010038275 BMPR2 BMPR2 LOC108887772 LOC108887772 ENSLCAP00010037509 ENSLCAP00010037509 nog nog zfpm2 zfpm2 TGFBR2 TGFBR2 LOC108895337 LOC108895337 smad6 smad6 ENSLCAP00010023739 ENSLCAP00010023739 ENSLCAP00010023696 ENSLCAP00010023696 Arnt2 Arnt2 LOC108900474 LOC108900474 Nkx2-5 Nkx2-5 LOC108876160 LOC108876160 LOC108874718 LOC108874718 SMAD4 SMAD4 LOC108888948 LOC108888948 GJA5 GJA5 ENSLCAP00010011759 ENSLCAP00010011759 smad7 smad7 LOC108896340 LOC108896340 prdm1 prdm1 ENSLCAP00010001230 ENSLCAP00010001230 ENSLCAP00010001596 ENSLCAP00010001596 ENSLCAP00010001604 ENSLCAP00010001604 LOC108887879 LOC108887879 med1 med1 LOC108874243 LOC108874243
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC108889232Uncharacterized protein. (260 aa)
ENSLCAP00010004708Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell. (311 aa)
nprl3Uncharacterized protein. (609 aa)
dctn5Uncharacterized protein. (182 aa)
sema3cUncharacterized protein; Belongs to the semaphorin family. (766 aa)
ENSLCAP00010001592Uncharacterized protein. (117 aa)
CPECarboxypeptidase E. (224 aa)
ENSLCAP00010058043BHLH domain-containing protein. (251 aa)
greb1Uncharacterized protein. (2007 aa)
sall4Uncharacterized protein. (1088 aa)
ENSLCAP00010052980Aryl hydrocarbon receptor nuclear translocator. (784 aa)
sav1Uncharacterized protein. (424 aa)
PTK7Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. (1109 aa)
tmem65Uncharacterized protein. (243 aa)
ccn1Uncharacterized protein. (374 aa)
CntrlUncharacterized protein. (710 aa)
ENSLCAP00010052259Uncharacterized protein. (364 aa)
HAND1Heart and neural crest derivatives expressed 1. (192 aa)
mstnTGF_BETA_2 domain-containing protein. (376 aa)
EDNRAG_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (474 aa)
ENSLCAP00010047727Endothelin receptor type Ab; Belongs to the G-protein coupled receptor 1 family. (458 aa)
LOC108886611Uncharacterized protein. (389 aa)
zmpste24CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family. (467 aa)
ENSLCAP00010043120PR domain containing 1b, with ZNF domain. (647 aa)
LOC108876301TGF-beta receptor type-2; Transmembrane serine/threonine kinase forming with the TGF- beta type I serine/threonine kinase receptor, TGFBR1, the non- promiscuous receptor for the TGF-beta cytokines TGFB1, TGFB2 and TGFB3. Transduces the TGFB1, TGFB2 and TGFB3 signal from the cell surface to the cytoplasm and is thus regulating a plethora of physiological and pathological processes including cell cycle arrest in epithelial and hematopoietic cells, control of mesenchymal cell proliferation and differentiation, wound healing, extracellular matrix production, immunosuppression and carcinoge [...] (591 aa)
ENSLCAP00010041994Neuropeptide Y receptor Y2; Belongs to the G-protein coupled receptor 1 family. (332 aa)
Sfrp2Secreted frizzled-related protein 2. (284 aa)
TNNC1Uncharacterized protein. (161 aa)
ENSLCAP00010041660Endothelin receptor type Aa; Belongs to the G-protein coupled receptor 1 family. (446 aa)
ENSLCAP00010041081Uncharacterized protein. (206 aa)
ENSLCAP00010039640SET domain-containing protein. (504 aa)
ENSLCAP00010039564Troponin I1, slow skeletal type. (186 aa)
ENSLCAP00010038275Carboxypeptidase E. (444 aa)
BMPR2Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (511 aa)
LOC108887772Uncharacterized protein. (677 aa)
ENSLCAP00010037509HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1. (870 aa)
nogNoggin; Belongs to the noggin family. (225 aa)
zfpm2Uncharacterized protein. (1179 aa)
TGFBR2Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (542 aa)
LOC108895337Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (213 aa)
smad6Mothers against decapentaplegic homolog. (491 aa)
ENSLCAP00010023739HECT domain containing 1. (1378 aa)
ENSLCAP00010023696Neuropeptide Y receptor Y7; Belongs to the G-protein coupled receptor 1 family. (373 aa)
Arnt2Aryl-hydrocarbon receptor nuclear translocator 2. (741 aa)
LOC108900474Uncharacterized protein. (161 aa)
Nkx2-5NK2 homeobox 5. (338 aa)
LOC108876160Transforming growth factor beta; Belongs to the TGF-beta family. (386 aa)
LOC108874718G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (404 aa)
SMAD4Mothers against decapentaplegic homolog. (524 aa)
LOC108888948Uncharacterized protein. (525 aa)
GJA5Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell. (336 aa)
ENSLCAP00010011759Troponin I type 1b (skeletal, slow). (176 aa)
smad7Mothers against decapentaplegic homolog. (376 aa)
LOC108896340Mothers against decapentaplegic homolog. (616 aa)
prdm1Uncharacterized protein. (857 aa)
ENSLCAP00010001230Nuclear receptor binding SET domain protein 2. (1162 aa)
ENSLCAP00010001596Mothers against decapentaplegic homolog. (531 aa)
ENSLCAP00010001604Uncharacterized protein. (188 aa)
LOC108887879Mothers against decapentaplegic homolog. (506 aa)
med1Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1836 aa)
LOC108874243Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (1262 aa)
Your Current Organism:
Lates calcarifer
NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch
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