(8 nodes) Response to UV-C network (Lates calcarifer)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Impact	Impact RWD domain protein. (244 aa)
	map3k4	Protein kinase domain-containing protein. (1587 aa)
	Brca2	Breast cancer 2, early onset. (2872 aa)
	ENSLCAP00010027006	Basic, immunoglobulin-like variable motif containing. (473 aa)
	polh	UmuC domain-containing protein. (738 aa)
	ercc5	Uncharacterized protein. (1138 aa)
	dcun1d3	DCN1-like protein. (330 aa)
	LOC108880508	Uncharacterized protein. (205 aa)

Your Current Organism:

Lates calcarifer

NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Brca2	ENSLCAP00010027006	ENSLCAP00010030231	ENSLCAP00010027006	Breast cancer 2, early onset.	Basic, immunoglobulin-like variable motif containing.	0.722
Brca2	ercc5	ENSLCAP00010030231	ENSLCAP00010021891	Breast cancer 2, early onset.	Uncharacterized protein.	0.722
Brca2	polh	ENSLCAP00010030231	ENSLCAP00010024082	Breast cancer 2, early onset.	UmuC domain-containing protein.	0.608
ENSLCAP00010027006	Brca2	ENSLCAP00010027006	ENSLCAP00010030231	Basic, immunoglobulin-like variable motif containing.	Breast cancer 2, early onset.	0.722
ENSLCAP00010027006	ercc5	ENSLCAP00010027006	ENSLCAP00010021891	Basic, immunoglobulin-like variable motif containing.	Uncharacterized protein.	0.867
ENSLCAP00010027006	polh	ENSLCAP00010027006	ENSLCAP00010024082	Basic, immunoglobulin-like variable motif containing.	UmuC domain-containing protein.	0.569
ercc5	Brca2	ENSLCAP00010021891	ENSLCAP00010030231	Uncharacterized protein.	Breast cancer 2, early onset.	0.722
ercc5	ENSLCAP00010027006	ENSLCAP00010021891	ENSLCAP00010027006	Uncharacterized protein.	Basic, immunoglobulin-like variable motif containing.	0.867
ercc5	polh	ENSLCAP00010021891	ENSLCAP00010024082	Uncharacterized protein.	UmuC domain-containing protein.	0.569
polh	Brca2	ENSLCAP00010024082	ENSLCAP00010030231	UmuC domain-containing protein.	Breast cancer 2, early onset.	0.608
polh	ENSLCAP00010027006	ENSLCAP00010024082	ENSLCAP00010027006	UmuC domain-containing protein.	Basic, immunoglobulin-like variable motif containing.	0.569
polh	ercc5	ENSLCAP00010024082	ENSLCAP00010021891	UmuC domain-containing protein.	Uncharacterized protein.	0.569