STRINGSTRING
LOC108876301 LOC108876301 ENSLCAP00010001596 ENSLCAP00010001596 ENSLCAP00010002339 ENSLCAP00010002339 Mcrip1 Mcrip1 Mtor Mtor tgfb2 tgfb2 gsc gsc lef1 lef1 LOC108896340 LOC108896340 spred3 spred3 ENSLCAP00010013550 ENSLCAP00010013550 SMAD4 SMAD4 LOC108876160 LOC108876160 LOC108895455 LOC108895455 ENSLCAP00010016757 ENSLCAP00010016757 TGFB3 TGFB3 ENSLCAP00010018377 ENSLCAP00010018377 ENSLCAP00010023358 ENSLCAP00010023358 Usf3 Usf3 glipr2 glipr2 TGFBR2 TGFBR2 GREM1 GREM1 LOC108889537 LOC108889537 nog nog LOC108897621 LOC108897621 hpn hpn bmp4 bmp4 ENSLCAP00010038155 ENSLCAP00010038155 LOC108883631 LOC108883631 ENSLCAP00010040901 ENSLCAP00010040901 Sfrp2 Sfrp2 tgfb3 tgfb3 LOC108872574 LOC108872574 Pofut2 Pofut2 LOC108886611 LOC108886611 LOC108895960 LOC108895960 ENSLCAP00010046255 ENSLCAP00010046255 Dab2 Dab2 LOC108888853 LOC108888853 LOC108891875 LOC108891875 ENSLCAP00010050412 ENSLCAP00010050412 LOC108878374 LOC108878374 trim62 trim62 LOC108885946 LOC108885946 ENSLCAP00010055980 ENSLCAP00010055980 ENSLCAP00010056362 ENSLCAP00010056362 znf750 znf750 LOC108894863 LOC108894863 bambi bambi
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC108876301TGF-beta receptor type-2; Transmembrane serine/threonine kinase forming with the TGF- beta type I serine/threonine kinase receptor, TGFBR1, the non- promiscuous receptor for the TGF-beta cytokines TGFB1, TGFB2 and TGFB3. Transduces the TGFB1, TGFB2 and TGFB3 signal from the cell surface to the cytoplasm and is thus regulating a plethora of physiological and pathological processes including cell cycle arrest in epithelial and hematopoietic cells, control of mesenchymal cell proliferation and differentiation, wound healing, extracellular matrix production, immunosuppression and carcinoge [...] (591 aa)
ENSLCAP00010001596Mothers against decapentaplegic homolog. (531 aa)
ENSLCAP00010002339FHA domain-containing protein. (184 aa)
Mcrip1MAPK regulated corepressor interacting protein 1. (101 aa)
MtorSerine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family. (2508 aa)
tgfb2Transforming growth factor beta; Belongs to the TGF-beta family. (444 aa)
gscHomeobox domain-containing protein. (241 aa)
lef1HMG box domain-containing protein. (379 aa)
LOC108896340Mothers against decapentaplegic homolog. (616 aa)
spred3Uncharacterized protein. (588 aa)
ENSLCAP00010013550Pleckstrin homology-like domain, family B, member 1b. (1573 aa)
SMAD4Mothers against decapentaplegic homolog. (524 aa)
LOC108876160Transforming growth factor beta; Belongs to the TGF-beta family. (386 aa)
LOC108895455C2H2-type domain-containing protein. (592 aa)
ENSLCAP00010016757PH domain-containing protein. (101 aa)
TGFB3Transforming growth factor beta; Belongs to the TGF-beta family. (408 aa)
ENSLCAP00010018377Pleckstrin homology-like domain, family B, member 2b. (1388 aa)
ENSLCAP00010023358Pleckstrin homology-like domain family B member 2. (101 aa)
Usf3Upstream transcription factor family member 3. (1728 aa)
glipr2SCP domain-containing protein; Belongs to the CRISP family. (202 aa)
TGFBR2Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (542 aa)
GREM1Gremlin. (182 aa)
LOC108889537Peptidase S72 domain-containing protein. (910 aa)
nogNoggin; Belongs to the noggin family. (225 aa)
LOC108897621Uncharacterized protein. (179 aa)
hpnUncharacterized protein; Belongs to the peptidase S1 family. (427 aa)
bmp4TGF_BETA_2 domain-containing protein. (457 aa)
ENSLCAP00010038155Lethal giant larvae homolog 2 (Drosophila). (949 aa)
LOC108883631Uncharacterized protein. (984 aa)
ENSLCAP00010040901Bone morphogenetic protein 16. (394 aa)
Sfrp2Secreted frizzled-related protein 2. (284 aa)
tgfb3Transforming growth factor beta; Belongs to the TGF-beta family. (405 aa)
LOC108872574Transforming growth factor beta; Belongs to the TGF-beta family. (420 aa)
Pofut2Protein O-fucosyltransferase 2. (446 aa)
LOC108886611Uncharacterized protein. (389 aa)
LOC108895960Uncharacterized protein. (341 aa)
ENSLCAP00010046255Uncharacterized protein. (315 aa)
Dab2Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila). (776 aa)
LOC108888853Ephrin RBD domain-containing protein; Belongs to the ephrin family. (227 aa)
LOC108891875Uncharacterized protein. (356 aa)
ENSLCAP00010050412Homeobox domain-containing protein. (205 aa)
LOC108878374Interleukin-1. (278 aa)
trim62Uncharacterized protein. (475 aa)
LOC108885946Ephrin RBD domain-containing protein; Belongs to the ephrin family. (234 aa)
ENSLCAP00010055980Homeobox domain-containing protein. (225 aa)
ENSLCAP00010056362ALX homeobox 1. (303 aa)
znf750zf-C2H2_7 domain-containing protein. (600 aa)
LOC108894863Peptidase S72 domain-containing protein. (907 aa)
bambiBMP and activin membrane-bound inhibitor homolog; Negatively regulates TGF-beta signaling. Belongs to the BAMBI family. (259 aa)
Your Current Organism:
Lates calcarifer
NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch
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