STRINGSTRING
Slc3a1 Slc3a1 LOC108901820 LOC108901820 LOC108873575 LOC108873575 LOC108878991 LOC108878991 LOC108886877 LOC108886877 LOC108878971 LOC108878971 Slc25a13 Slc25a13 LOC108877928 LOC108877928 SLC25A12 SLC25A12 ENSLCAP00010046317 ENSLCAP00010046317 lrrc8d lrrc8d SLC25A12-2 SLC25A12-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Slc3a1Solute carrier family 3 (amino acid transporter heavy chain), member 1. (555 aa)
LOC108901820Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (328 aa)
LOC108873575Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (332 aa)
LOC108878991Pannexin_like domain-containing protein. (851 aa)
LOC108886877Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (325 aa)
LOC108878971Pannexin_like domain-containing protein. (795 aa)
Slc25a13Solute carrier family 25 (aspartate/glutamate carrier), member 13; Belongs to the mitochondrial carrier (TC 2.A.29) family. (706 aa)
LOC108877928Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (341 aa)
SLC25A12Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (685 aa)
ENSLCAP00010046317Aamy domain-containing protein. (188 aa)
lrrc8dPannexin_like domain-containing protein. (852 aa)
SLC25A12-2Solute carrier family 25 member 12; Belongs to the mitochondrial carrier (TC 2.A.29) family. (663 aa)
Your Current Organism:
Lates calcarifer
NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch
Server load: low (12%) [HD]