STRINGSTRING
LOC108879275 LOC108879275 ENSLCAP00010006641 ENSLCAP00010006641 ENSLCAP00010006855 ENSLCAP00010006855 Stbd1 Stbd1 GABARAPL2 GABARAPL2 LOC108891182 LOC108891182 LOC108883363 LOC108883363 rb1cc1 rb1cc1 snapin snapin ulk2 ulk2 ENSLCAP00010011651 ENSLCAP00010011651 cunh5orf51 cunh5orf51 stx17 stx17 ENSLCAP00010012156 ENSLCAP00010012156 ufc1 ufc1 PHB2 PHB2 vps41 vps41 yod1 yod1 Fam134c Fam134c ENSLCAP00010015822 ENSLCAP00010015822 ENSLCAP00010015830 ENSLCAP00010015830 gabarap gabarap LOC108889980 LOC108889980 bag3 bag3 epm2a epm2a Uba5 Uba5 hdac10 hdac10 ENSLCAP00010017786 ENSLCAP00010017786 atg16l1 atg16l1 Map1lc3a Map1lc3a vti1a vti1a ENSLCAP00010004390 ENSLCAP00010004390 snap29 snap29 wdr81 wdr81 atp13a2 atp13a2 ENSLCAP00010002741 ENSLCAP00010002741 Nsfl1c Nsfl1c Sqstm1 Sqstm1 snx30 snx30 ENSLCAP00010000206 ENSLCAP00010000206 ENSLCAP00010000202 ENSLCAP00010000202 vcp vcp epg5 epg5 lix1 lix1 ENSLCAP00010060032 ENSLCAP00010060032 rab23 rab23 ENSLCAP00010059397 ENSLCAP00010059397 LOC108878720 LOC108878720 atg14 atg14 Ulk3 Ulk3 ENSLCAP00010058617 ENSLCAP00010058617 vps33a vps33a retreg2 retreg2 Vps16 Vps16 ENSLCAP00010055057 ENSLCAP00010055057 LOC108888563 LOC108888563 ENSLCAP00010053946 ENSLCAP00010053946 sting1 sting1 ufm1 ufm1 LOC108879747 LOC108879747 pink1-2 pink1-2 ripk2 ripk2 ENSLCAP00010051333 ENSLCAP00010051333 Wdr45 Wdr45 pacs2 pacs2 atg3 atg3 LOC108884012 LOC108884012 ENSLCAP00010018801 ENSLCAP00010018801 LOC108889987 LOC108889987 LOC108896745 LOC108896745 ENSLCAP00010019157 ENSLCAP00010019157 tmem41b tmem41b LOC108889006 LOC108889006 ENSLCAP00010019675 ENSLCAP00010019675 tp53inp1 tp53inp1 spns1 spns1 LOC108879045 LOC108879045 ENSLCAP00010020326 ENSLCAP00010020326 LOC108888930 LOC108888930 Pik3c3 Pik3c3 Wipi2 Wipi2 ENSLCAP00010020990 ENSLCAP00010020990 Atg12 Atg12 Svip Svip LOC108875514 LOC108875514 Dfnb59 Dfnb59 vps39 vps39 Atg4b Atg4b ILRUN ILRUN ENSLCAP00010006385 ENSLCAP00010006385 ENSLCAP00010024687 ENSLCAP00010024687 map1lc3c map1lc3c LOC108895223 LOC108895223 LOC108885429 LOC108885429 ENSLCAP00010025602 ENSLCAP00010025602 WIPI1 WIPI1 Ufl1 Ufl1 LOC108895335 LOC108895335 LOC108890662 LOC108890662 ENSLCAP00010029379 ENSLCAP00010029379 LIX1L LIX1L calcoco2 calcoco2 ubxn2a ubxn2a ENSLCAP00010031318 ENSLCAP00010031318 LOC108874432 LOC108874432 ENSLCAP00010049229 ENSLCAP00010049229 LOC108874357 LOC108874357 vti1b vti1b LOC108885638 LOC108885638 LOC108889848 LOC108889848 ENSLCAP00010031439 ENSLCAP00010031439 ENSLCAP00010031592 ENSLCAP00010031592 ogt ogt ENSLCAP00010046611 ENSLCAP00010046611 LOC108877935 LOC108877935 SNX14 SNX14 ENSLCAP00010044319 ENSLCAP00010044319 atg7 atg7 ATG2B ATG2B Atg2a Atg2a ENSLCAP00010042190 ENSLCAP00010042190 atg13 atg13 ENSLCAP00010041949 ENSLCAP00010041949 Wdr45b Wdr45b taz taz ZFYVE1 ZFYVE1 nod1 nod1 Emc6 Emc6 LOC108882245 LOC108882245 RAB19 RAB19 ENSLCAP00010039973 ENSLCAP00010039973 LOC108885562 LOC108885562 LOC108898450 LOC108898450 RAB7A RAB7A ENSLCAP00010038893 ENSLCAP00010038893 plaa plaa Wdfy3 Wdfy3 ENSLCAP00010036105 ENSLCAP00010036105 pink1 pink1 ENSLCAP00010035056 ENSLCAP00010035056 nod2 nod2 atg101 atg101 ENSLCAP00010034154 ENSLCAP00010034154 ENSLCAP00010032556 ENSLCAP00010032556 ei24 ei24 ENSLCAP00010032246 ENSLCAP00010032246 ENSLCAP00010031904 ENSLCAP00010031904
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC108879275Protein kinase domain-containing protein. (1026 aa)
ENSLCAP00010006641DUF4206 domain-containing protein. (346 aa)
ENSLCAP00010006855Uncharacterized protein. (245 aa)
Stbd1CBM20 domain-containing protein. (894 aa)
GABARAPL2GABA type A receptor associated protein like 2. (135 aa)
LOC108891182Autophagy protein 5; Involved in autophagic vesicle formation. (314 aa)
LOC108883363Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. (810 aa)
rb1cc1ATG11 domain-containing protein. (1651 aa)
snapinUncharacterized protein. (129 aa)
ulk2Protein kinase domain-containing protein. (1040 aa)
ENSLCAP00010011651Pleckstrin homology domain containing, family M (with RUN domain) member 1. (790 aa)
cunh5orf51Uncharacterized protein. (306 aa)
stx17t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (302 aa)
ENSLCAP00010012156Tectonin beta-propeller repeat containing 1a. (426 aa)
ufc1Ubiquitin-fold modifier-conjugating enzyme 1; E2-like enzyme which forms an intermediate with UFM1 via a thioester linkage. (171 aa)
PHB2Prohibitin 2. (374 aa)
vps41Vacuolar protein sorting-associated protein 41 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport pathways; Belongs to the VPS41 family. (853 aa)
yod1Uncharacterized protein. (301 aa)
Fam134cReticulophagy regulator family member 3. (498 aa)
ENSLCAP00010015822Uncharacterized protein. (542 aa)
ENSLCAP00010015830DUF4206 domain-containing protein. (234 aa)
gabarapUncharacterized protein. (122 aa)
LOC108889980Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (186 aa)
bag3Uncharacterized protein. (572 aa)
epm2aUncharacterized protein. (316 aa)
Uba5Ubiquitin-like modifier activating enzyme 5. (446 aa)
hdac10Hist_deacetyl domain-containing protein. (679 aa)
ENSLCAP00010017786Trafficking protein particle complex 8. (1447 aa)
atg16l1WD_REPEATS_REGION domain-containing protein. (644 aa)
Map1lc3aMicrotubule-associated protein 1 light chain 3 alpha. (112 aa)
vti1at-SNARE coiled-coil homology domain-containing protein. (224 aa)
ENSLCAP00010004390UBX domain protein 6. (440 aa)
snap29Uncharacterized protein. (259 aa)
wdr81Uncharacterized protein. (2123 aa)
atp13a2Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily. (1161 aa)
ENSLCAP00010002741Prohibitin. (349 aa)
Nsfl1cNSFL1 (p97) cofactor (p47). (409 aa)
Sqstm1Sequestosome 1. (341 aa)
snx30PX domain-containing protein. (443 aa)
ENSLCAP00010000206RUN domain-containing protein. (92 aa)
ENSLCAP00010000202MFS domain-containing protein. (132 aa)
vcpUncharacterized protein. (872 aa)
epg5Uncharacterized protein. (2593 aa)
lix1Uncharacterized protein. (355 aa)
ENSLCAP00010060032Neighbor of brca1 gene 1a. (685 aa)
rab23Uncharacterized protein. (235 aa)
ENSLCAP00010059397Uncharacterized protein. (103 aa)
LOC108878720V-SNARE coiled-coil homology domain-containing protein. (125 aa)
atg14Galectin domain-containing protein. (555 aa)
Ulk3Protein kinase domain-containing protein. (135 aa)
ENSLCAP00010058617ZFYVE21_C domain-containing protein. (176 aa)
vps33aUncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (610 aa)
retreg2Uncharacterized protein. (589 aa)
Vps16Vacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS16 family. (818 aa)
ENSLCAP00010055057Ring finger protein 213b. (3448 aa)
LOC108888563PX domain-containing protein. (301 aa)
ENSLCAP00010053946Lysosomal-associated membrane protein 2. (264 aa)
sting1Uncharacterized protein. (409 aa)
ufm1Ubiquitin-fold modifier 1; Ubiquitin-like modifier which can be covalently attached to substrate proteins as a monomer or a lysine-linked polymer in a post- translational process called ufmylation. Ufmylation on lysine residues of proteins may play a crucial role in a number of cellular processes. (87 aa)
LOC108879747Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (187 aa)
pink1-2Serine/threonine-protein kinase PINK1, mitochondrial-like. (575 aa)
ripk2Uncharacterized protein. (603 aa)
ENSLCAP00010051333Unc-51 like autophagy activating kinase 1a. (797 aa)
Wdr45WD repeat domain 45. (359 aa)
pacs2Uncharacterized protein. (890 aa)
atg3Autophagy-related protein 3. (318 aa)
LOC108884012WD_REPEATS_REGION domain-containing protein. (612 aa)
ENSLCAP00010018801WD_REPEATS_REGION domain-containing protein. (394 aa)
LOC108889987Uncharacterized protein. (308 aa)
LOC108896745Autophagy_act_C domain-containing protein. (243 aa)
ENSLCAP00010019157Neighbor of brca1 gene 1b. (1011 aa)
tmem41bUncharacterized protein. (283 aa)
LOC108889006Uncharacterized protein. (214 aa)
ENSLCAP00010019675Si:ch211-108d22.2. (1541 aa)
tp53inp1Uncharacterized protein. (294 aa)
spns1MFS domain-containing protein. (507 aa)
LOC108879045UBX domain-containing protein. (478 aa)
ENSLCAP00010020326Uncharacterized protein. (123 aa)
LOC108888930Uncharacterized protein. (222 aa)
Pik3c3Phosphatidylinositol 3-kinase catalytic subunit type 3. (879 aa)
Wipi2WD repeat domain, phosphoinositide interacting 2. (430 aa)
ENSLCAP00010020990Zgc:101577. (281 aa)
Atg12Uncharacterized protein. (127 aa)
SvipSi:ch73-147o17.1. (110 aa)
LOC108875514Uncharacterized protein. (242 aa)
Dfnb59Pejvakin. (356 aa)
vps39CNH domain-containing protein. (876 aa)
Atg4bCysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (398 aa)
ILRUNN_BRCA1_IG domain-containing protein. (293 aa)
ENSLCAP00010006385Beclin 1, autophagy related. (432 aa)
ENSLCAP00010024687N_BRCA1_IG domain-containing protein. (606 aa)
map1lc3cUncharacterized protein. (128 aa)
LOC108895223Uncharacterized protein. (201 aa)
LOC108885429Uncharacterized protein; Belongs to the AAA ATPase family. (841 aa)
ENSLCAP00010025602Autophagy protein 5; Involved in autophagic vesicle formation. (178 aa)
WIPI1WD repeat domain, phosphoinositide interacting 1. (405 aa)
Ufl1UFM1-specific ligase 1. (771 aa)
LOC108895335Uncharacterized protein. (207 aa)
LOC108890662Uncharacterized protein. (692 aa)
ENSLCAP00010029379Tectonin beta-propeller repeat containing 1b. (1112 aa)
LIX1LUncharacterized protein. (356 aa)
calcoco2SKICH domain-containing protein. (600 aa)
ubxn2aUncharacterized protein. (249 aa)
ENSLCAP00010031318RING-type domain-containing protein. (4082 aa)
LOC108874432WD_REPEATS_REGION domain-containing protein. (612 aa)
ENSLCAP00010049229Prohibitin. (283 aa)
LOC108874357E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily. (463 aa)
vti1bt-SNARE coiled-coil homology domain-containing protein. (227 aa)
LOC108885638Uncharacterized protein. (285 aa)
LOC108889848Uncharacterized protein. (339 aa)
ENSLCAP00010031439Microtubule-associated protein 1 light chain 3 beta. (135 aa)
ENSLCAP00010031592Uncharacterized protein. (1221 aa)
ogtTPR_REGION domain-containing protein. (1111 aa)
ENSLCAP00010046611RUN and cysteine rich domain containing beclin 1 interacting protein like. (322 aa)
LOC108877935Uncharacterized protein. (182 aa)
SNX14Sorting nexin 14. (962 aa)
ENSLCAP00010044319PX domain-containing protein. (377 aa)
atg7Uncharacterized protein. (738 aa)
ATG2BUncharacterized protein. (2076 aa)
Atg2aAutophagy related 2A. (1981 aa)
ENSLCAP00010042190NACHT domain-containing protein. (1278 aa)
atg13Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily. (541 aa)
ENSLCAP00010041949Zinc finger, FYVE domain containing 1. (786 aa)
Wdr45bWD repeat domain 45B. (334 aa)
tazTafazzin family protein; Belongs to the taffazin family. (264 aa)
ZFYVE1Uncharacterized protein. (786 aa)
nod1Uncharacterized protein. (939 aa)
Emc6ER membrane protein complex subunit 6. (111 aa)
LOC108882245Uncharacterized protein. (936 aa)
RAB19Uncharacterized protein. (232 aa)
ENSLCAP00010039973ATG10 autophagy related 10 homolog (S. cerevisiae). (191 aa)
LOC108885562Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (186 aa)
LOC108898450PX domain-containing protein. (423 aa)
RAB7AUncharacterized protein. (207 aa)
ENSLCAP00010038893GABA(A) receptor-associated protein like 2. (157 aa)
plaaUncharacterized protein. (798 aa)
Wdfy3WD repeat and FYVE domain containing 3. (3531 aa)
ENSLCAP00010036105TBC1 domain family, member 5. (834 aa)
pink1Protein kinase domain-containing protein. (575 aa)
ENSLCAP00010035056Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. (888 aa)
nod2Uncharacterized protein. (988 aa)
atg101Uncharacterized protein. (218 aa)
ENSLCAP00010034154UV radiation resistance associated gene. (669 aa)
ENSLCAP00010032556Uncharacterized protein. (202 aa)
ei24Uncharacterized protein. (340 aa)
ENSLCAP00010032246Battenin. (378 aa)
ENSLCAP00010031904E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily. (459 aa)
Your Current Organism:
Lates calcarifer
NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch
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