(21 nodes) Integral component of mitochondrial outer membrane network (Lates calcarifer)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	rhot2	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family. (628 aa)
	ENSLCAP00010005799	Uncharacterized protein. (190 aa)
	TOMM20	Uncharacterized protein. (174 aa)
	LOC108880508	Uncharacterized protein. (205 aa)
	bnip3	Uncharacterized protein. (191 aa)
	LOC108888713	Uncharacterized protein. (146 aa)
	ENSLCAP00010029820	Ras homolog family member T1a. (724 aa)
	tomm70	TPR_REGION domain-containing protein. (578 aa)
	gdap1	Uncharacterized protein; Belongs to the GST superfamily. (361 aa)
	LOC108883544	RING-type domain-containing protein. (345 aa)
	pink1	Protein kinase domain-containing protein. (575 aa)
	Fundc1	Uncharacterized protein. (233 aa)
	cfap70	Uncharacterized protein. (1080 aa)
	pink1-2	Serine/threonine-protein kinase PINK1, mitochondrial-like. (575 aa)
	mul1	RING-type domain-containing protein. (352 aa)
	FUNDC1	Uncharacterized protein. (158 aa)
	ENSLCAP00010053657	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family. (637 aa)
	ENSLCAP00010056255	Uncharacterized protein. (256 aa)
	RHOT1	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family. (653 aa)
	ENSLCAP00010057666	ATP-binding cassette, sub-family B (MDR/TAP), member 6b. (634 aa)
	Abcb6	ATP-binding cassette, sub-family B (MDR/TAP), member 6a. (861 aa)

Your Current Organism:

Lates calcarifer

NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSLCAP00010005799	FUNDC1	ENSLCAP00010005799	ENSLCAP00010052578	Uncharacterized protein.	Uncharacterized protein.	0.418
ENSLCAP00010005799	Fundc1	ENSLCAP00010005799	ENSLCAP00010036791	Uncharacterized protein.	Uncharacterized protein.	0.418
ENSLCAP00010005799	bnip3	ENSLCAP00010005799	ENSLCAP00010020835	Uncharacterized protein.	Uncharacterized protein.	0.904
ENSLCAP00010029820	ENSLCAP00010056255	ENSLCAP00010029820	ENSLCAP00010056255	Ras homolog family member T1a.	Uncharacterized protein.	0.533
ENSLCAP00010029820	LOC108883544	ENSLCAP00010029820	ENSLCAP00010033630	Ras homolog family member T1a.	RING-type domain-containing protein.	0.449
ENSLCAP00010029820	LOC108888713	ENSLCAP00010029820	ENSLCAP00010024742	Ras homolog family member T1a.	Uncharacterized protein.	0.568
ENSLCAP00010029820	TOMM20	ENSLCAP00010029820	ENSLCAP00010011584	Ras homolog family member T1a.	Uncharacterized protein.	0.568
ENSLCAP00010029820	mul1	ENSLCAP00010029820	ENSLCAP00010052410	Ras homolog family member T1a.	RING-type domain-containing protein.	0.449
ENSLCAP00010029820	pink1	ENSLCAP00010029820	ENSLCAP00010035987	Ras homolog family member T1a.	Protein kinase domain-containing protein.	0.408
ENSLCAP00010029820	pink1-2	ENSLCAP00010029820	ENSLCAP00010052377	Ras homolog family member T1a.	Serine/threonine-protein kinase PINK1, mitochondrial-like.	0.408
ENSLCAP00010029820	tomm70	ENSLCAP00010029820	ENSLCAP00010030943	Ras homolog family member T1a.	TPR_REGION domain-containing protein.	0.635
ENSLCAP00010053657	ENSLCAP00010056255	ENSLCAP00010053657	ENSLCAP00010056255	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.	Uncharacterized protein.	0.533
ENSLCAP00010053657	LOC108883544	ENSLCAP00010053657	ENSLCAP00010033630	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.	RING-type domain-containing protein.	0.449
ENSLCAP00010053657	LOC108888713	ENSLCAP00010053657	ENSLCAP00010024742	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.	Uncharacterized protein.	0.568
ENSLCAP00010053657	RHOT1	ENSLCAP00010053657	ENSLCAP00010056446	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.	0.900
ENSLCAP00010053657	TOMM20	ENSLCAP00010053657	ENSLCAP00010011584	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.	Uncharacterized protein.	0.568
ENSLCAP00010053657	mul1	ENSLCAP00010053657	ENSLCAP00010052410	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.	RING-type domain-containing protein.	0.449
ENSLCAP00010053657	pink1	ENSLCAP00010053657	ENSLCAP00010035987	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.	Protein kinase domain-containing protein.	0.938
ENSLCAP00010053657	pink1-2	ENSLCAP00010053657	ENSLCAP00010052377	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.	Serine/threonine-protein kinase PINK1, mitochondrial-like.	0.408
ENSLCAP00010053657	tomm70	ENSLCAP00010053657	ENSLCAP00010030943	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.	TPR_REGION domain-containing protein.	0.635