25 items (Lates calcarifer) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSLCAP00010056253	Protein tyrosine phosphatase, receptor-type, Z polypeptide 1b. (1429 aa)
	Mtor	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family. (2508 aa)
	eif2ak3	Protein kinase domain-containing protein. (1105 aa)
	epha4	Uncharacterized protein. (989 aa)
	LOC108880948	Uncharacterized protein. (1418 aa)
	LOC108881887	WH2 domain-containing protein. (553 aa)
	ENSLCAP00010015424	WH2 domain-containing protein. (406 aa)
	ENSLCAP00010020668	Kinesin family member 14; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1183 aa)
	FIG4	FIG4 phosphoinositide 5-phosphatase. (894 aa)
	LOC108882264	WH2 domain-containing protein. (506 aa)
	LOC108895221	Protein kinase domain-containing protein. (260 aa)
	ENSLCAP00010024920	Uncharacterized protein. (425 aa)
	ENSLCAP00010059236	BHLH domain-containing protein. (152 aa)
	wasf3	WH2 domain-containing protein. (489 aa)
	TPPP	Uncharacterized protein. (268 aa)
	ENSLCAP00010027430	Uncharacterized protein. (1508 aa)
	LOC108890556	Uncharacterized protein. (744 aa)
	LOC108883624	Uncharacterized protein. (1165 aa)
	tnfrsf21	Uncharacterized protein. (694 aa)
	CST7	Cystatin F. (133 aa)
	rnf10	RING-type domain-containing protein. (786 aa)
	ctsc	Pept_C1 domain-containing protein; Belongs to the peptidase C1 family. (457 aa)
	PARD3	Par-3 family cell polarity regulator. (1233 aa)
	ENSLCAP00010050973	Zinc finger protein 16 like. (514 aa)
	tmem98	Uncharacterized protein. (224 aa)

Your Current Organism:

Lates calcarifer

NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSLCAP00010024920	LOC108895221	ENSLCAP00010024920	ENSLCAP00010024912	Uncharacterized protein.	Protein kinase domain-containing protein.	0.472
LOC108881887	LOC108882264	ENSLCAP00010012675	ENSLCAP00010024256	WH2 domain-containing protein.	WH2 domain-containing protein.	0.901
LOC108881887	wasf3	ENSLCAP00010012675	ENSLCAP00010026933	WH2 domain-containing protein.	WH2 domain-containing protein.	0.901
LOC108882264	LOC108881887	ENSLCAP00010024256	ENSLCAP00010012675	WH2 domain-containing protein.	WH2 domain-containing protein.	0.901
LOC108882264	wasf3	ENSLCAP00010024256	ENSLCAP00010026933	WH2 domain-containing protein.	WH2 domain-containing protein.	0.902
LOC108895221	ENSLCAP00010024920	ENSLCAP00010024912	ENSLCAP00010024920	Protein kinase domain-containing protein.	Uncharacterized protein.	0.472
wasf3	LOC108881887	ENSLCAP00010026933	ENSLCAP00010012675	WH2 domain-containing protein.	WH2 domain-containing protein.	0.901
wasf3	LOC108882264	ENSLCAP00010026933	ENSLCAP00010024256	WH2 domain-containing protein.	WH2 domain-containing protein.	0.902