8 items (Lates calcarifer) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSLCAP00010051333	Unc-51 like autophagy activating kinase 1a. (797 aa)
	rb1cc1	ATG11 domain-containing protein. (1651 aa)
	ulk2	Protein kinase domain-containing protein. (1040 aa)
	LOC108879275	Protein kinase domain-containing protein. (1026 aa)
	ATG2B	Uncharacterized protein. (2076 aa)
	atg13	Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily. (541 aa)
	Atg2a	Autophagy related 2A. (1981 aa)
	atg7	Uncharacterized protein. (738 aa)

Your Current Organism:

Lates calcarifer

NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATG2B	Atg2a	ENSLCAP00010043755	ENSLCAP00010043208	Uncharacterized protein.	Autophagy related 2A.	0.909
ATG2B	ENSLCAP00010051333	ENSLCAP00010043755	ENSLCAP00010051333	Uncharacterized protein.	Unc-51 like autophagy activating kinase 1a.	0.807
ATG2B	LOC108879275	ENSLCAP00010043755	ENSLCAP00010024436	Uncharacterized protein.	Protein kinase domain-containing protein.	0.979
ATG2B	atg13	ENSLCAP00010043755	ENSLCAP00010041989	Uncharacterized protein.	Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily.	0.557
ATG2B	atg7	ENSLCAP00010043755	ENSLCAP00010043910	Uncharacterized protein.	Uncharacterized protein.	0.574
ATG2B	rb1cc1	ENSLCAP00010043755	ENSLCAP00010010849	Uncharacterized protein.	ATG11 domain-containing protein.	0.612
ATG2B	ulk2	ENSLCAP00010043755	ENSLCAP00010011399	Uncharacterized protein.	Protein kinase domain-containing protein.	0.979
Atg2a	ATG2B	ENSLCAP00010043208	ENSLCAP00010043755	Autophagy related 2A.	Uncharacterized protein.	0.909
Atg2a	ENSLCAP00010051333	ENSLCAP00010043208	ENSLCAP00010051333	Autophagy related 2A.	Unc-51 like autophagy activating kinase 1a.	0.807
Atg2a	LOC108879275	ENSLCAP00010043208	ENSLCAP00010024436	Autophagy related 2A.	Protein kinase domain-containing protein.	0.979
Atg2a	atg13	ENSLCAP00010043208	ENSLCAP00010041989	Autophagy related 2A.	Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily.	0.557
Atg2a	atg7	ENSLCAP00010043208	ENSLCAP00010043910	Autophagy related 2A.	Uncharacterized protein.	0.574
Atg2a	rb1cc1	ENSLCAP00010043208	ENSLCAP00010010849	Autophagy related 2A.	ATG11 domain-containing protein.	0.612
Atg2a	ulk2	ENSLCAP00010043208	ENSLCAP00010011399	Autophagy related 2A.	Protein kinase domain-containing protein.	0.979
ENSLCAP00010051333	ATG2B	ENSLCAP00010051333	ENSLCAP00010043755	Unc-51 like autophagy activating kinase 1a.	Uncharacterized protein.	0.807
ENSLCAP00010051333	Atg2a	ENSLCAP00010051333	ENSLCAP00010043208	Unc-51 like autophagy activating kinase 1a.	Autophagy related 2A.	0.807
ENSLCAP00010051333	atg13	ENSLCAP00010051333	ENSLCAP00010041989	Unc-51 like autophagy activating kinase 1a.	Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily.	0.950
ENSLCAP00010051333	atg7	ENSLCAP00010051333	ENSLCAP00010043910	Unc-51 like autophagy activating kinase 1a.	Uncharacterized protein.	0.575
ENSLCAP00010051333	rb1cc1	ENSLCAP00010051333	ENSLCAP00010010849	Unc-51 like autophagy activating kinase 1a.	ATG11 domain-containing protein.	0.948
LOC108879275	ATG2B	ENSLCAP00010024436	ENSLCAP00010043755	Protein kinase domain-containing protein.	Uncharacterized protein.	0.979