STRINGSTRING
ENSLCAP00010040277 ENSLCAP00010040277 ENSLCAP00010032593 ENSLCAP00010032593 yju2 yju2 ENSLCAP00010029188 ENSLCAP00010029188 kmt5a kmt5a ENSLCAP00010019789 ENSLCAP00010019789 eef1e1 eef1e1 marchf7 marchf7 Sirt1 Sirt1 ZNHIT1 ZNHIT1 ENSLCAP00010060824 ENSLCAP00010060824 LOC108876957 LOC108876957 zmpste24 zmpste24 LOC108876260 LOC108876260 snai2 snai2 Psmd10 Psmd10
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSLCAP00010040277Lysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. (854 aa)
ENSLCAP00010032593Zinc finger, HIT-type containing 1. (188 aa)
yju2Uncharacterized protein. (344 aa)
ENSLCAP00010029188ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family. (2552 aa)
kmt5aSET domain-containing protein. (327 aa)
ENSLCAP00010019789SET and MYND domain containing 2b. (393 aa)
eef1e1GST C-terminal domain-containing protein. (173 aa)
marchf7RING-CH-type domain-containing protein. (854 aa)
Sirt1Deacetylase sirtuin-type domain-containing protein. (705 aa)
ZNHIT1Zinc finger HIT-type containing 1. (188 aa)
ENSLCAP00010060824Lysine methyltransferase 5Ab. (182 aa)
LOC108876957Uncharacterized protein. (435 aa)
zmpste24CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family. (467 aa)
LOC108876260Uncharacterized protein. (198 aa)
snai2Uncharacterized protein. (260 aa)
Psmd10Proteasome 26S subunit, non-ATPase 10. (228 aa)
Your Current Organism:
Lates calcarifer
NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch
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