STRINGSTRING
LOC108893103 LOC108893103 med1 med1 LOC108874243 LOC108874243 serpine2 serpine2 ptn ptn LOC108882770 LOC108882770 ENSLCAP00010008828 ENSLCAP00010008828 prdm1 prdm1 LOC108884930 LOC108884930 ENSLCAP00010013310 ENSLCAP00010013310 LOC108894301 LOC108894301 ENSLCAP00010014965 ENSLCAP00010014965 ppard ppard ENSLCAP00010017430 ENSLCAP00010017430 Ptgs2 Ptgs2 ENSLCAP00010018230 ENSLCAP00010018230 prdx3 prdx3 polr1b polr1b dazap1 dazap1 LOC108875504 LOC108875504 ENSLCAP00010022688 ENSLCAP00010022688 crhbp crhbp tmed2 tmed2 ucn ucn ENSLCAP00010024786 ENSLCAP00010024786 ENSLCAP00010026213 ENSLCAP00010026213 LOC108893942 LOC108893942 ENSLCAP00010026709 ENSLCAP00010026709 LOC108881787 LOC108881787 TCF24 TCF24 Prdm14 Prdm14 tekt3 tekt3 ENSLCAP00010032129 ENSLCAP00010032129 SP3 SP3 LOC108898639 LOC108898639 ENSLCAP00010034924 ENSLCAP00010034924 p2rx1 p2rx1 BMPR2 BMPR2 ENSLCAP00010038771 ENSLCAP00010038771 LOC108881433 LOC108881433 ENSLCAP00010039033 ENSLCAP00010039033 ENSLCAP00010039640 ENSLCAP00010039640 fosl1 fosl1 ENSLCAP00010043120 ENSLCAP00010043120 LOC108898682 LOC108898682 ENSLCAP00010044261 ENSLCAP00010044261 LOC108892573 LOC108892573 LOC108873031 LOC108873031 LOC108875663 LOC108875663 ENSLCAP00010048015 ENSLCAP00010048015 LOC108897190 LOC108897190 LOC108893617 LOC108893617 LOC108888483 LOC108888483 ENSLCAP00010053254 ENSLCAP00010053254 ENSLCAP00010053263 ENSLCAP00010053263 LOC108875788 LOC108875788 ash1l ash1l a1cf a1cf ENSLCAP00010059524 ENSLCAP00010059524 pla2g6 pla2g6
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC108893103Stork_head domain-containing protein. (1080 aa)
med1Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1836 aa)
LOC108874243Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (1262 aa)
serpine2SERPIN domain-containing protein; Belongs to the serpin family. (397 aa)
ptnUncharacterized protein. (223 aa)
LOC108882770Uncharacterized protein. (691 aa)
ENSLCAP00010008828Corticotropin-releasing factor-binding protein; Binds CRF and inactivates it. May prevent inappropriate pituitary-adrenal stimulation in pregnancy. Belongs to the CRF-binding protein family. (322 aa)
prdm1Uncharacterized protein. (857 aa)
LOC108884930CRF domain-containing protein. (140 aa)
ENSLCAP00010013310Uncharacterized protein. (422 aa)
LOC108894301Uncharacterized protein. (178 aa)
ENSLCAP00010014965Hydroxysteroid (11-beta) dehydrogenase 2; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (391 aa)
ppardUncharacterized protein. (510 aa)
ENSLCAP0001001743015-hydroxyprostaglandin dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (247 aa)
Ptgs2Prostaglandin-endoperoxide synthase 2b. (612 aa)
ENSLCAP00010018230EGF-like domain-containing protein. (341 aa)
prdx3Thioredoxin domain-containing protein. (239 aa)
polr1bDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1160 aa)
dazap1Uncharacterized protein. (450 aa)
LOC108875504Stork_head domain-containing protein. (1029 aa)
ENSLCAP00010022688Aconitate decarboxylase 1. (439 aa)
crhbpCorticotropin-releasing factor-binding protein; Binds CRF and inactivates it. May prevent inappropriate pituitary-adrenal stimulation in pregnancy. Belongs to the CRF-binding protein family. (323 aa)
tmed2GOLD domain-containing protein. (207 aa)
ucnCRF domain-containing protein. (146 aa)
ENSLCAP00010024786C-type lectin domain-containing protein. (124 aa)
ENSLCAP00010026213Growth hormone secretagogue receptor b; Belongs to the G-protein coupled receptor 1 family. (386 aa)
LOC108893942Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (256 aa)
ENSLCAP00010026709Transcription factor 23. (147 aa)
LOC108881787CRF domain-containing protein. (171 aa)
TCF24BHLH domain-containing protein. (179 aa)
Prdm14PR domain containing 14. (587 aa)
tekt3Uncharacterized protein. (487 aa)
ENSLCAP00010032129Immunoresponsive gene 1, like. (448 aa)
SP3Uncharacterized protein. (703 aa)
LOC108898639Fibronectin type-III domain-containing protein. (543 aa)
ENSLCAP00010034924Sp3b transcription factor. (646 aa)
p2rx1P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel. (421 aa)
BMPR2Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (511 aa)
ENSLCAP00010038771Prolactin 2. (215 aa)
LOC108881433Motilin_assoc domain-containing protein. (107 aa)
ENSLCAP00010039033Peptidylglycine alpha-amidating monooxygenase. (793 aa)
ENSLCAP00010039640SET domain-containing protein. (504 aa)
fosl1BZIP domain-containing protein. (344 aa)
ENSLCAP00010043120PR domain containing 1b, with ZNF domain. (647 aa)
LOC108898682BZIP domain-containing protein. (328 aa)
ENSLCAP00010044261Zgc:172341. (308 aa)
LOC108892573PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family. (207 aa)
LOC108873031Uncharacterized protein. (266 aa)
LOC108875663BZIP domain-containing protein. (331 aa)
ENSLCAP00010048015Integrin beta. (1823 aa)
LOC108897190Uncharacterized protein. (275 aa)
LOC108893617Uncharacterized protein. (765 aa)
LOC108888483Uncharacterized protein. (225 aa)
ENSLCAP00010053254Uncharacterized protein. (1024 aa)
ENSLCAP00010053263Uncharacterized protein. (839 aa)
LOC108875788Uncharacterized protein. (178 aa)
ash1lUncharacterized protein. (2045 aa)
a1cfUncharacterized protein. (616 aa)
ENSLCAP00010059524Hyaluronidase. (447 aa)
pla2g6Uncharacterized protein. (825 aa)
Your Current Organism:
Lates calcarifer
NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch
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