STRINGSTRING
LOC108896602 LOC108896602 ENSLCAP00010058119 ENSLCAP00010058119 sash3 sash3 ENSLCAP00010054078 ENSLCAP00010054078 ripk2 ripk2 ENSLCAP00010050095 ENSLCAP00010050095 vsir vsir LOC108875542-2 LOC108875542-2 LOC108893693 LOC108893693 LOC108893209 LOC108893209 LOC108876301 LOC108876301 hlx hlx dusp10 dusp10 bad bad Zbtb1 Zbtb1 SART1 SART1 ENSLCAP00010036940 ENSLCAP00010036940 tespa1 tespa1 myb myb Xbp1 Xbp1 TGFBR2 TGFBR2 ENSLCAP00010026273 ENSLCAP00010026273 syk syk cbfb cbfb gata3 gata3 cd83 cd83 nfkbid nfkbid ENSLCAP00010016433 ENSLCAP00010016433 LOC108876160 LOC108876160 Ptprc Ptprc lef1 lef1 LOC108875423 LOC108875423 LOC108875542 LOC108875542 ENSLCAP00010007675 ENSLCAP00010007675 ENSLCAP00010005783 ENSLCAP00010005783 ENSLCAP00010001948 ENSLCAP00010001948
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC108896602Tyrosine-protein kinase. (608 aa)
ENSLCAP00010058119MALT paracaspase 2. (565 aa)
sash3Uncharacterized protein. (402 aa)
ENSLCAP00010054078NACHT domain-containing protein. (935 aa)
ripk2Uncharacterized protein. (603 aa)
ENSLCAP00010050095Uncharacterized protein. (723 aa)
vsirIg-like domain-containing protein. (297 aa)
LOC108875542-2Interleukin-7 receptor subunit alpha-like. (431 aa)
LOC108893693Uncharacterized protein. (888 aa)
LOC108893209Fibronectin type-III domain-containing protein. (352 aa)
LOC108876301TGF-beta receptor type-2; Transmembrane serine/threonine kinase forming with the TGF- beta type I serine/threonine kinase receptor, TGFBR1, the non- promiscuous receptor for the TGF-beta cytokines TGFB1, TGFB2 and TGFB3. Transduces the TGFB1, TGFB2 and TGFB3 signal from the cell surface to the cytoplasm and is thus regulating a plethora of physiological and pathological processes including cell cycle arrest in epithelial and hematopoietic cells, control of mesenchymal cell proliferation and differentiation, wound healing, extracellular matrix production, immunosuppression and carcinoge [...] (591 aa)
hlxHomeobox domain-containing protein. (399 aa)
dusp10Uncharacterized protein; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (472 aa)
badUncharacterized protein. (229 aa)
Zbtb1Zinc finger and BTB domain containing 1. (699 aa)
SART1Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP. (505 aa)
ENSLCAP00010036940MALT paracaspase 1. (806 aa)
tespa1KRAP_IP3R_bind domain-containing protein. (665 aa)
mybUncharacterized protein. (655 aa)
Xbp1BZIP domain-containing protein. (264 aa)
TGFBR2Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (542 aa)
ENSLCAP00010026273ANK_REP_REGION domain-containing protein. (409 aa)
sykTyrosine-protein kinase. (620 aa)
cbfbUncharacterized protein. (188 aa)
gata3Uncharacterized protein. (443 aa)
cd83Ig-like domain-containing protein. (225 aa)
nfkbidANK_REP_REGION domain-containing protein. (455 aa)
ENSLCAP00010016433Uncharacterized protein. (693 aa)
LOC108876160Transforming growth factor beta; Belongs to the TGF-beta family. (386 aa)
PtprcProtein tyrosine phosphatase, receptor type, C. (856 aa)
lef1HMG box domain-containing protein. (379 aa)
LOC108875423Uncharacterized protein. (654 aa)
LOC108875542Fibronectin type-III domain-containing protein. (431 aa)
ENSLCAP00010007675Amino_oxidase domain-containing protein. (277 aa)
ENSLCAP00010005783Suppressor of cytokine signaling 1a. (215 aa)
ENSLCAP00010001948Ig-like domain-containing protein. (217 aa)
Your Current Organism:
Lates calcarifer
NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch
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