STRINGSTRING
errfi1 errfi1 LOC108874243 LOC108874243 LOC108886185 LOC108886185 rc3h2 rc3h2 stk40 stk40 phf14 phf14 ENSLCAP00010010539 ENSLCAP00010010539 LOC108876160 LOC108876160 itgb6 itgb6 Slc7a11 Slc7a11 atxn1l atxn1l tcf21 tcf21 BMPR2 BMPR2 LOC108887772 LOC108887772 LOC108873031 LOC108873031 LOC108897190 LOC108897190 ENSLCAP00010048690 ENSLCAP00010048690
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
errfi1Inhibitor_Mig-6 domain-containing protein. (447 aa)
LOC108874243Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (1262 aa)
LOC108886185Uncharacterized protein. (557 aa)
rc3h2Uncharacterized protein. (1154 aa)
stk40Protein kinase domain-containing protein. (436 aa)
phf14Uncharacterized protein. (952 aa)
ENSLCAP00010010539Endothelin 2. (170 aa)
LOC108876160Transforming growth factor beta; Belongs to the TGF-beta family. (386 aa)
itgb6Integrin beta; Belongs to the integrin beta chain family. (806 aa)
Slc7a11Solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11. (516 aa)
atxn1lAXH domain-containing protein. (841 aa)
tcf21BHLH domain-containing protein. (176 aa)
BMPR2Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (511 aa)
LOC108887772Uncharacterized protein. (677 aa)
LOC108873031Uncharacterized protein. (266 aa)
LOC108897190Uncharacterized protein. (275 aa)
ENSLCAP00010048690Protein kinase domain containing, cytoplasmic b. (481 aa)
Your Current Organism:
Lates calcarifer
NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.