STRINGSTRING
ENSLCAP00010059417 ENSLCAP00010059417 ENSLCAP00010004739 ENSLCAP00010004739 brca1 brca1 ENSLCAP00010014176 ENSLCAP00010014176 Sirt1 Sirt1 prdm12 prdm12 Jarid2 Jarid2 ENSLCAP00010030113 ENSLCAP00010030113 ENSLCAP00010032564 ENSLCAP00010032564 myb myb Mecp2 Mecp2 ENSLCAP00010039432 ENSLCAP00010039432 ENSLCAP00010040277 ENSLCAP00010040277 ENSLCAP00010043553 ENSLCAP00010043553 LOC108883687 LOC108883687 LOC108889015 LOC108889015 ENSLCAP00010051031 ENSLCAP00010051031 ENSLCAP00010052194 ENSLCAP00010052194 dnmt1 dnmt1 ENSLCAP00010058195 ENSLCAP00010058195
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSLCAP00010059417Lysine (K)-specific demethylase 4C. (1016 aa)
ENSLCAP00010004739PHD-type domain-containing protein. (207 aa)
brca1Uncharacterized protein. (1411 aa)
ENSLCAP00010014176Lysine (K)-specific demethylase 4B. (869 aa)
Sirt1Deacetylase sirtuin-type domain-containing protein. (705 aa)
prdm12Uncharacterized protein. (395 aa)
Jarid2Jumonji, AT rich interactive domain 2b. (821 aa)
ENSLCAP00010030113Uncharacterized protein. (77 aa)
ENSLCAP00010032564Alpha thalassemia/mental retardation syndrome X-linked homolog (human). (1999 aa)
mybUncharacterized protein. (655 aa)
Mecp2Methyl CpG binding protein 2. (1030 aa)
ENSLCAP00010039432Euchromatic histone-lysine N-methyltransferase 2. (865 aa)
ENSLCAP00010040277Lysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. (854 aa)
ENSLCAP00010043553Replication timing regulatory factor 1. (2186 aa)
LOC108883687Uncharacterized protein. (1203 aa)
LOC108889015Uncharacterized protein. (1376 aa)
ENSLCAP00010051031Alpha thalassemia/mental retardation syndrome X-linked, like. (1695 aa)
ENSLCAP00010052194PR domain zinc finger protein 12; Involved in the positive regulation of histone H3-K9 dimethylation; Belongs to the class V-like SAM-binding methyltransferase superfamily. (385 aa)
dnmt1DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (1511 aa)
ENSLCAP00010058195Euchromatic histone-lysine N-methyltransferase 1a. (841 aa)
Your Current Organism:
Lates calcarifer
NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch
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