(14 nodes) Protein localization to chromosome, telomeric region network (Lates calcarifer)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSLCAP00010000450	TINF2_N domain-containing protein. (96 aa)
	ENSLCAP00010055044	HTH myb-type domain-containing protein. (124 aa)
	Pot1	Protection of telomeres 1 homolog. (536 aa)
	ENSLCAP00010002254	Poly [ADP-ribose] polymerase. (1272 aa)
	ENSLCAP00010029188	ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family. (2552 aa)
	Brca2	Breast cancer 2, early onset. (2872 aa)
	ENSLCAP00010032078	PIN2 (TERF1) interacting telomerase inhibitor 1. (221 aa)
	ENSLCAP00010032564	Alpha thalassemia/mental retardation syndrome X-linked homolog (human). (1999 aa)
	ENSLCAP00010038926	Poly [ADP-ribose] polymerase. (1259 aa)
	znf827	Uncharacterized protein. (1521 aa)
	LOC108878510	Poly [ADP-ribose] polymerase. (1263 aa)
	ENSLCAP00010044578	Uncharacterized protein. (476 aa)
	ENSLCAP00010051031	Alpha thalassemia/mental retardation syndrome X-linked, like. (1695 aa)
	Terf2	Uncharacterized protein. (185 aa)

Your Current Organism:

Lates calcarifer

NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Brca2	ENSLCAP00010029188	ENSLCAP00010030231	ENSLCAP00010029188	Breast cancer 2, early onset.	ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family.	0.597
Brca2	ENSLCAP00010032564	ENSLCAP00010030231	ENSLCAP00010032564	Breast cancer 2, early onset.	Alpha thalassemia/mental retardation syndrome X-linked homolog (human).	0.435
Brca2	ENSLCAP00010051031	ENSLCAP00010030231	ENSLCAP00010051031	Breast cancer 2, early onset.	Alpha thalassemia/mental retardation syndrome X-linked, like.	0.435
ENSLCAP00010000450	ENSLCAP00010002254	ENSLCAP00010000450	ENSLCAP00010002254	TINF2_N domain-containing protein.	Poly [ADP-ribose] polymerase.	0.464
ENSLCAP00010000450	ENSLCAP00010032564	ENSLCAP00010000450	ENSLCAP00010032564	TINF2_N domain-containing protein.	Alpha thalassemia/mental retardation syndrome X-linked homolog (human).	0.498
ENSLCAP00010000450	ENSLCAP00010038926	ENSLCAP00010000450	ENSLCAP00010038926	TINF2_N domain-containing protein.	Poly [ADP-ribose] polymerase.	0.464
ENSLCAP00010000450	ENSLCAP00010044578	ENSLCAP00010000450	ENSLCAP00010044578	TINF2_N domain-containing protein.	Uncharacterized protein.	0.990
ENSLCAP00010000450	ENSLCAP00010051031	ENSLCAP00010000450	ENSLCAP00010051031	TINF2_N domain-containing protein.	Alpha thalassemia/mental retardation syndrome X-linked, like.	0.498
ENSLCAP00010000450	LOC108878510	ENSLCAP00010000450	ENSLCAP00010044410	TINF2_N domain-containing protein.	Poly [ADP-ribose] polymerase.	0.464
ENSLCAP00010000450	Pot1	ENSLCAP00010000450	ENSLCAP00010000524	TINF2_N domain-containing protein.	Protection of telomeres 1 homolog.	0.988
ENSLCAP00010000450	Terf2	ENSLCAP00010000450	ENSLCAP00010055041	TINF2_N domain-containing protein.	Uncharacterized protein.	0.984
ENSLCAP00010002254	ENSLCAP00010000450	ENSLCAP00010002254	ENSLCAP00010000450	Poly [ADP-ribose] polymerase.	TINF2_N domain-containing protein.	0.464
ENSLCAP00010029188	Brca2	ENSLCAP00010029188	ENSLCAP00010030231	ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family.	Breast cancer 2, early onset.	0.597
ENSLCAP00010032564	Brca2	ENSLCAP00010032564	ENSLCAP00010030231	Alpha thalassemia/mental retardation syndrome X-linked homolog (human).	Breast cancer 2, early onset.	0.435
ENSLCAP00010032564	ENSLCAP00010000450	ENSLCAP00010032564	ENSLCAP00010000450	Alpha thalassemia/mental retardation syndrome X-linked homolog (human).	TINF2_N domain-containing protein.	0.498
ENSLCAP00010032564	Pot1	ENSLCAP00010032564	ENSLCAP00010000524	Alpha thalassemia/mental retardation syndrome X-linked homolog (human).	Protection of telomeres 1 homolog.	0.638
ENSLCAP00010038926	ENSLCAP00010000450	ENSLCAP00010038926	ENSLCAP00010000450	Poly [ADP-ribose] polymerase.	TINF2_N domain-containing protein.	0.464
ENSLCAP00010044578	ENSLCAP00010000450	ENSLCAP00010044578	ENSLCAP00010000450	Uncharacterized protein.	TINF2_N domain-containing protein.	0.990
ENSLCAP00010044578	ENSLCAP00010055044	ENSLCAP00010044578	ENSLCAP00010055044	Uncharacterized protein.	HTH myb-type domain-containing protein.	0.951
ENSLCAP00010044578	Pot1	ENSLCAP00010044578	ENSLCAP00010000524	Uncharacterized protein.	Protection of telomeres 1 homolog.	0.985