STRINGSTRING
Sirt1 Sirt1 brca1 brca1 LOC108891182 LOC108891182 ENSLCAP00010025602 ENSLCAP00010025602 Auts2 Auts2 zmpste24 zmpste24
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sirt1Deacetylase sirtuin-type domain-containing protein. (705 aa)
brca1Uncharacterized protein. (1411 aa)
LOC108891182Autophagy protein 5; Involved in autophagic vesicle formation. (314 aa)
ENSLCAP00010025602Autophagy protein 5; Involved in autophagic vesicle formation. (178 aa)
Auts2Autism susceptibility candidate 2a. (1265 aa)
zmpste24CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family. (467 aa)
Your Current Organism:
Lates calcarifer
NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch
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