(11 nodes) Mitochondrial outer membrane permeabilization network (Lates calcarifer)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSLCAP00010005799	Uncharacterized protein. (190 aa)
	bax	Uncharacterized protein. (192 aa)
	bnip3	Uncharacterized protein. (191 aa)
	ENSLCAP00010029820	Ras homolog family member T1a. (724 aa)
	LOC108886659	Uncharacterized protein. (329 aa)
	cfap70	Uncharacterized protein. (1080 aa)
	LOC108886659-2	Uncharacterized protein. (223 aa)
	ENSLCAP00010053657	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family. (637 aa)
	RHOT1	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family. (653 aa)
	rhot2	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family. (628 aa)
	LOC108878313	Uncharacterized protein. (238 aa)

Your Current Organism:

Lates calcarifer

NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSLCAP00010005799	LOC108878313	ENSLCAP00010005799	ENSLCAP00010058307	Uncharacterized protein.	Uncharacterized protein.	0.658
ENSLCAP00010005799	LOC108886659	ENSLCAP00010005799	ENSLCAP00010031519	Uncharacterized protein.	Uncharacterized protein.	0.658
ENSLCAP00010005799	LOC108886659-2	ENSLCAP00010005799	ENSLCAP00010048272	Uncharacterized protein.	Uncharacterized protein.	0.657
ENSLCAP00010005799	bnip3	ENSLCAP00010005799	ENSLCAP00010020835	Uncharacterized protein.	Uncharacterized protein.	0.904
ENSLCAP00010053657	RHOT1	ENSLCAP00010053657	ENSLCAP00010056446	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.	0.900
LOC108878313	ENSLCAP00010005799	ENSLCAP00010058307	ENSLCAP00010005799	Uncharacterized protein.	Uncharacterized protein.	0.658
LOC108878313	LOC108886659-2	ENSLCAP00010058307	ENSLCAP00010048272	Uncharacterized protein.	Uncharacterized protein.	0.901
LOC108878313	bnip3	ENSLCAP00010058307	ENSLCAP00010020835	Uncharacterized protein.	Uncharacterized protein.	0.678
LOC108886659	ENSLCAP00010005799	ENSLCAP00010031519	ENSLCAP00010005799	Uncharacterized protein.	Uncharacterized protein.	0.658
LOC108886659	bnip3	ENSLCAP00010031519	ENSLCAP00010020835	Uncharacterized protein.	Uncharacterized protein.	0.678
LOC108886659-2	ENSLCAP00010005799	ENSLCAP00010048272	ENSLCAP00010005799	Uncharacterized protein.	Uncharacterized protein.	0.657
LOC108886659-2	LOC108878313	ENSLCAP00010048272	ENSLCAP00010058307	Uncharacterized protein.	Uncharacterized protein.	0.901
LOC108886659-2	bnip3	ENSLCAP00010048272	ENSLCAP00010020835	Uncharacterized protein.	Uncharacterized protein.	0.678
RHOT1	ENSLCAP00010053657	ENSLCAP00010056446	ENSLCAP00010053657	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.	0.900
bnip3	ENSLCAP00010005799	ENSLCAP00010020835	ENSLCAP00010005799	Uncharacterized protein.	Uncharacterized protein.	0.904
bnip3	LOC108878313	ENSLCAP00010020835	ENSLCAP00010058307	Uncharacterized protein.	Uncharacterized protein.	0.678
bnip3	LOC108886659	ENSLCAP00010020835	ENSLCAP00010031519	Uncharacterized protein.	Uncharacterized protein.	0.678
bnip3	LOC108886659-2	ENSLCAP00010020835	ENSLCAP00010048272	Uncharacterized protein.	Uncharacterized protein.	0.678