65 items (Lates calcarifer) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC108879606	Adenylate cyclase; Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling. (1132 aa)
	ENSLCAP00010047527	TGFb_propeptide domain-containing protein. (130 aa)
	LOC108886198	Uncharacterized protein. (368 aa)
	LOC108898233	Uncharacterized protein. (637 aa)
	P2RY6	G_PROTEIN_RECEP_F1_2 domain-containing protein. (369 aa)
	tfap4	BHLH domain-containing protein. (333 aa)
	Tgfbi	Transforming growth factor, beta-induced. (679 aa)
	elk1	ETS domain-containing protein. (587 aa)
	LOC108891666	Inhibitor_Mig-6 domain-containing protein. (381 aa)
	casp9	Uncharacterized protein; Belongs to the peptidase C14A family. (457 aa)
	aifm1	Uncharacterized protein. (745 aa)
	LOC108893617	Uncharacterized protein. (765 aa)
	errfi1	Inhibitor_Mig-6 domain-containing protein. (447 aa)
	park7	DJ-1_PfpI domain-containing protein. (189 aa)
	ENSLCAP00010053180	Periostin, osteoblast specific factor a. (842 aa)
	ENSLCAP00010054314	Si:ch211-132f19.7; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family. (844 aa)
	Dcps	Decapping enzyme, scavenger. (329 aa)
	smyd3	Uncharacterized protein. (445 aa)
	LOC108898929	TGF_BETA_2 domain-containing protein. (389 aa)
	Adcy5	Adenylate cyclase; Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling. (1184 aa)
	P2RY4	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (362 aa)
	ENSLCAP00010037389	annotation not available (375 aa)
	rwdd1	RWD domain-containing protein. (240 aa)
	LOC108898134	Uncharacterized protein. (293 aa)
	LOC108875401	Uncharacterized protein. (359 aa)
	ENSLCAP00010032129	Immunoresponsive gene 1, like. (448 aa)
	LOC108900625	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (373 aa)
	ENSLCAP00010030780	Periostin, osteoblast specific factor b. (773 aa)
	ENSLCAP00010028729	Cytochrome P450, family 1, subfamily C, polypeptide 1; Belongs to the cytochrome P450 family. (522 aa)
	ENSLCAP00010027592	G_PROTEIN_RECEP_F1_2 domain-containing protein. (375 aa)
	LOC108901740	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (353 aa)
	ENSLCAP00010025147	Si:dkey-6n21.13; Belongs to the G-protein coupled receptor 1 family. (473 aa)
	ENSLCAP00010024897	Uncharacterized protein. (353 aa)
	ENSLCAP00010024439	Prostaglandin F receptor (FP). (337 aa)
	TFAP4	BHLH domain-containing protein. (332 aa)
	ENSLCAP00010022688	Aconitate decarboxylase 1. (439 aa)
	gas6	Uncharacterized protein. (651 aa)
	LOC108883417	Adenylate cyclase; Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling. (1158 aa)
	LOC108895615	Adenylate cyclase; Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling. (1184 aa)
	LOC108886282	Uncharacterized protein; Belongs to the cytochrome P450 family. (559 aa)
	prkaa2	Non-specific serine/threonine protein kinase. (557 aa)
	ENSLCAP00010014182	Uncharacterized protein. (900 aa)
	PCK1	Uncharacterized protein. (624 aa)
	adcy8	Adenylate cyclase; Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling. (1240 aa)
	LOC108882313	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (443 aa)
	Usp8	Ubiquitin specific peptidase 8; Belongs to the peptidase C19 family. (1087 aa)
	ENSLCAP00010009186	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (401 aa)
	LOC108882770	Uncharacterized protein. (691 aa)
	LOC108883342	Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. (280 aa)
	LOC108883341	Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. (265 aa)
	ENSLCAP00010007608	Aquaporin 1a (Colton blood group), tandem duplicate 2; Belongs to the MIP/aquaporin (TC 1.A.8) family. (277 aa)
	LOC108886083	Adenylate cyclase; Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling. (1134 aa)
	LOC108874022	Uncharacterized protein. (293 aa)
	ENSLCAP00010048282	Prostaglandin E receptor 4 (subtype EP4) c; Belongs to the G-protein coupled receptor 1 family. (301 aa)
	LOC108896866	Adenylate cyclase; Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling. (1165 aa)
	LOC108893191	Uncharacterized protein. (1003 aa)
	LOC108876515	Adenylate cyclase; Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling. (1182 aa)
	LOC108884388	Uncharacterized protein. (624 aa)
	adcy6	Adenylate cyclase; Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling. (1210 aa)
	NDOR1	NADPH-dependent diflavin oxidoreductase 1; Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Required for the maturation of extramitochondrial Fe-S proteins. Part of an electron transfer chain functioning in an early step of cytosolic Fe-S biogenesis. Transfers electrons from NADPH to the Fe/S cluster of CIAPIN1. In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. (608 aa)
	cftr	Cystic fibrosis transmembrane conductance regulator; Epithelial ion channel that plays an important role in the regulation of epithelial ion and water transport and fluid homeostasis. Mediates the transport of chloride ions across the cell membrane. Channel activity is coupled to ATP hydrolysis. The ion channel is also permeable to HCO(3-); selectivity depends on the extracellular chloride concentration. Exerts its function also by modulating the activity of other ion channels and transporters. Contributes to the regulation of the pH and the ion content of the epithelial fluid layer. (1510 aa)
	ENSLCAP00010003732	5'-3' exoribonuclease 1. (1558 aa)
	recql5	Uncharacterized protein. (1020 aa)
	ptger4	G_PROTEIN_RECEP_F1_2 domain-containing protein. (450 aa)
	prkaa1	Non-specific serine/threonine protein kinase. (573 aa)

Your Current Organism:

Lates calcarifer

NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Adcy5	ENSLCAP00010054314	ENSLCAP00010037840	ENSLCAP00010054314	Adenylate cyclase; Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling.	Si:ch211-132f19.7; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.	0.422
Adcy5	LOC108875401	ENSLCAP00010037840	ENSLCAP00010032721	Adenylate cyclase; Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling.	Uncharacterized protein.	0.772
Adcy5	LOC108879606	ENSLCAP00010037840	ENSLCAP00010047328	Adenylate cyclase; Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling.	Adenylate cyclase; Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling.	0.422
Adcy5	LOC108883417	ENSLCAP00010037840	ENSLCAP00010021012	Adenylate cyclase; Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling.	Adenylate cyclase; Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling.	0.421
Adcy5	LOC108886083	ENSLCAP00010037840	ENSLCAP00010007057	Adenylate cyclase; Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling.	Adenylate cyclase; Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling.	0.432
Adcy5	LOC108886198	ENSLCAP00010037840	ENSLCAP00010006488	Adenylate cyclase; Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling.	Uncharacterized protein.	0.772
Adcy5	LOC108895615	ENSLCAP00010037840	ENSLCAP00010020994	Adenylate cyclase; Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling.	Adenylate cyclase; Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling.	0.420
Adcy5	LOC108896866	ENSLCAP00010037840	ENSLCAP00010038389	Adenylate cyclase; Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling.	Adenylate cyclase; Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling.	0.442
Adcy5	adcy8	ENSLCAP00010037840	ENSLCAP00010012163	Adenylate cyclase; Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling.	Adenylate cyclase; Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling.	0.423
Dcps	ENSLCAP00010003732	ENSLCAP00010054545	ENSLCAP00010003732	Decapping enzyme, scavenger.	5'-3' exoribonuclease 1.	0.703
Dcps	NDOR1	ENSLCAP00010054545	ENSLCAP00010046315	Decapping enzyme, scavenger.	NADPH-dependent diflavin oxidoreductase 1; Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Required for the maturation of extramitochondrial Fe-S proteins. Part of an electron transfer chain functioning in an early step of cytosolic Fe-S biogenesis. Transfers electrons from NADPH to the Fe/S cluster of CIAPIN1. In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.	0.630
ENSLCAP00010003732	Dcps	ENSLCAP00010003732	ENSLCAP00010054545	5'-3' exoribonuclease 1.	Decapping enzyme, scavenger.	0.703
ENSLCAP00010022688	aifm1	ENSLCAP00010022688	ENSLCAP00010048385	Aconitate decarboxylase 1.	Uncharacterized protein.	0.669
ENSLCAP00010024439	ENSLCAP00010027592	ENSLCAP00010024439	ENSLCAP00010027592	Prostaglandin F receptor (FP).	G_PROTEIN_RECEP_F1_2 domain-containing protein.	0.900
ENSLCAP00010027592	ENSLCAP00010024439	ENSLCAP00010027592	ENSLCAP00010024439	G_PROTEIN_RECEP_F1_2 domain-containing protein.	Prostaglandin F receptor (FP).	0.900
ENSLCAP00010032129	aifm1	ENSLCAP00010032129	ENSLCAP00010048385	Immunoresponsive gene 1, like.	Uncharacterized protein.	0.669
ENSLCAP00010048282	LOC108900625	ENSLCAP00010048282	ENSLCAP00010031509	Prostaglandin E receptor 4 (subtype EP4) c; Belongs to the G-protein coupled receptor 1 family.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.474
ENSLCAP00010048282	LOC108901740	ENSLCAP00010048282	ENSLCAP00010025600	Prostaglandin E receptor 4 (subtype EP4) c; Belongs to the G-protein coupled receptor 1 family.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.457
ENSLCAP00010054314	Adcy5	ENSLCAP00010054314	ENSLCAP00010037840	Si:ch211-132f19.7; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.	Adenylate cyclase; Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling.	0.422
ENSLCAP00010054314	LOC108876515	ENSLCAP00010054314	ENSLCAP00010040582	Si:ch211-132f19.7; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.	Adenylate cyclase; Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling.	0.427