9 items (Lates calcarifer) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSLCAP00010005004	Fibroblast growth factor 18a; Belongs to the heparin-binding growth factors family. (221 aa)
	ENSLCAP00010014878	Heat shock protein, alpha-crystallin-related, b15; Belongs to the small heat shock protein (HSP20) family. (193 aa)
	LOC108889968	Uncharacterized protein. (1377 aa)
	Lgmn	Legumain. (425 aa)
	mst1r	Uncharacterized protein. (1374 aa)
	hspb1	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family. (203 aa)
	LOC108901542	Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (217 aa)
	Met	MET proto-oncogene, receptor tyrosine kinase. (1377 aa)
	fgf16	Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (217 aa)

Your Current Organism:

Lates calcarifer

NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSLCAP00010005004	Met	ENSLCAP00010005004	ENSLCAP00010004840	Fibroblast growth factor 18a; Belongs to the heparin-binding growth factors family.	MET proto-oncogene, receptor tyrosine kinase.	0.695
ENSLCAP00010005004	fgf16	ENSLCAP00010005004	ENSLCAP00010032353	Fibroblast growth factor 18a; Belongs to the heparin-binding growth factors family.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.446
LOC108889968	Met	ENSLCAP00010017828	ENSLCAP00010004840	Uncharacterized protein.	MET proto-oncogene, receptor tyrosine kinase.	0.700
LOC108889968	mst1r	ENSLCAP00010017828	ENSLCAP00010039979	Uncharacterized protein.	Uncharacterized protein.	0.706
LOC108901542	fgf16	ENSLCAP00010002516	ENSLCAP00010032353	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.446
Met	ENSLCAP00010005004	ENSLCAP00010004840	ENSLCAP00010005004	MET proto-oncogene, receptor tyrosine kinase.	Fibroblast growth factor 18a; Belongs to the heparin-binding growth factors family.	0.695
Met	LOC108889968	ENSLCAP00010004840	ENSLCAP00010017828	MET proto-oncogene, receptor tyrosine kinase.	Uncharacterized protein.	0.700
Met	fgf16	ENSLCAP00010004840	ENSLCAP00010032353	MET proto-oncogene, receptor tyrosine kinase.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.677
Met	mst1r	ENSLCAP00010004840	ENSLCAP00010039979	MET proto-oncogene, receptor tyrosine kinase.	Uncharacterized protein.	0.700
fgf16	ENSLCAP00010005004	ENSLCAP00010032353	ENSLCAP00010005004	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Fibroblast growth factor 18a; Belongs to the heparin-binding growth factors family.	0.446
fgf16	LOC108901542	ENSLCAP00010032353	ENSLCAP00010002516	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.446
fgf16	Met	ENSLCAP00010032353	ENSLCAP00010004840	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	MET proto-oncogene, receptor tyrosine kinase.	0.677
mst1r	LOC108889968	ENSLCAP00010039979	ENSLCAP00010017828	Uncharacterized protein.	Uncharacterized protein.	0.706
mst1r	Met	ENSLCAP00010039979	ENSLCAP00010004840	Uncharacterized protein.	MET proto-oncogene, receptor tyrosine kinase.	0.700