STRINGSTRING
Lmna Lmna LOC108872650 LOC108872650 LOC108880527 LOC108880527 NARF NARF hlcs hlcs ENSLCAP00010033594 ENSLCAP00010033594 CASK CASK LOC108872986 LOC108872986 lmnb1 lmnb1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LmnaLamin A; Belongs to the intermediate filament family. (671 aa)
LOC108872650Fe_hyd_SSU domain-containing protein; Belongs to the NARF family. (460 aa)
LOC108880527Uncharacterized protein; Belongs to the intermediate filament family. (595 aa)
NARFFe_hyd_SSU domain-containing protein; Belongs to the NARF family. (461 aa)
hlcsBPL/LPL catalytic domain-containing protein. (930 aa)
ENSLCAP00010033594Uncharacterized protein; Belongs to the intermediate filament family. (606 aa)
CASKCalcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family. (897 aa)
LOC108872986Uncharacterized protein; Belongs to the MAGUK family. (935 aa)
lmnb1Uncharacterized protein; Belongs to the intermediate filament family. (588 aa)
Your Current Organism:
Lates calcarifer
NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch
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