(26 nodes) Perikaryon network (Lates calcarifer)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DIP2C	DMAP-interaction domain-containing protein. (1623 aa)
	ENSLCAP00010003951	Sodium channel, voltage-gated, type I, beta a. (238 aa)
	dhx36	Uncharacterized protein. (1079 aa)
	ENSLCAP00010008828	Corticotropin-releasing factor-binding protein; Binds CRF and inactivates it. May prevent inappropriate pituitary-adrenal stimulation in pregnancy. Belongs to the CRF-binding protein family. (322 aa)
	glra1	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (453 aa)
	Atoh7	Atonal bHLH transcription factor 7. (143 aa)
	LOC108900109	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (510 aa)
	rogdi	Uncharacterized protein. (297 aa)
	crhbp	Corticotropin-releasing factor-binding protein; Binds CRF and inactivates it. May prevent inappropriate pituitary-adrenal stimulation in pregnancy. Belongs to the CRF-binding protein family. (323 aa)
	ucn	CRF domain-containing protein. (146 aa)
	ENSLCAP00010023779	Disco-interacting protein 2 homolog Ba. (1586 aa)
	ENSLCAP00010029454	BTB domain-containing protein; Belongs to the potassium channel family. (851 aa)
	kcnb2	BTB domain-containing protein; Belongs to the potassium channel family. (855 aa)
	sirt2	NAD-dependent protein deacetylase; NAD-dependent protein deacetylase. (381 aa)
	Chat	Choline O-acetyltransferase a; Belongs to the carnitine/choline acetyltransferase family. (653 aa)
	kcnk1	Potassium channel subfamily K member. (335 aa)
	ENSLCAP00010037062	Disco-interacting protein 2 homolog Bb. (1600 aa)
	ptpn5	Uncharacterized protein. (573 aa)
	ENSLCAP00010041216	Opioid receptor, mu 1; Belongs to the G-protein coupled receptor 1 family. (401 aa)
	ngb	GLOBIN domain-containing protein; Belongs to the globin family. (159 aa)
	ENSLCAP00010045650	Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family. (616 aa)
	LOC108879605	RGS domain-containing protein. (174 aa)
	dip2a	DMAP-interaction domain-containing protein. (1603 aa)
	LOC108899024	Potassium channel subfamily K member. (349 aa)
	rufy3	Uncharacterized protein. (666 aa)
	LOC108885057	DMAP-interaction domain-containing protein. (1600 aa)

Your Current Organism:

Lates calcarifer

NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Chat	ENSLCAP00010045650	ENSLCAP00010034086	ENSLCAP00010045650	Choline O-acetyltransferase a; Belongs to the carnitine/choline acetyltransferase family.	Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family.	0.901
ENSLCAP00010008828	ucn	ENSLCAP00010008828	ENSLCAP00010023614	Corticotropin-releasing factor-binding protein; Binds CRF and inactivates it. May prevent inappropriate pituitary-adrenal stimulation in pregnancy. Belongs to the CRF-binding protein family.	CRF domain-containing protein.	0.709
ENSLCAP00010045650	Chat	ENSLCAP00010045650	ENSLCAP00010034086	Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family.	Choline O-acetyltransferase a; Belongs to the carnitine/choline acetyltransferase family.	0.901
LOC108900109	glra1	ENSLCAP00010017338	ENSLCAP00010013836	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	0.901
crhbp	ucn	ENSLCAP00010023037	ENSLCAP00010023614	Corticotropin-releasing factor-binding protein; Binds CRF and inactivates it. May prevent inappropriate pituitary-adrenal stimulation in pregnancy. Belongs to the CRF-binding protein family.	CRF domain-containing protein.	0.709
glra1	LOC108900109	ENSLCAP00010013836	ENSLCAP00010017338	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	0.901
ucn	ENSLCAP00010008828	ENSLCAP00010023614	ENSLCAP00010008828	CRF domain-containing protein.	Corticotropin-releasing factor-binding protein; Binds CRF and inactivates it. May prevent inappropriate pituitary-adrenal stimulation in pregnancy. Belongs to the CRF-binding protein family.	0.709
ucn	crhbp	ENSLCAP00010023614	ENSLCAP00010023037	CRF domain-containing protein.	Corticotropin-releasing factor-binding protein; Binds CRF and inactivates it. May prevent inappropriate pituitary-adrenal stimulation in pregnancy. Belongs to the CRF-binding protein family.	0.709