(39 nodes) Death domain network (Lates calcarifer)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSLCAP00010058824	Hematopoietic death receptor. (406 aa)
	LOC108891726	Uncharacterized protein. (433 aa)
	ENSLCAP00010060259	Ankyrin 2a, neuronal. (1835 aa)
	LOC108878750	Uncharacterized protein. (629 aa)
	unc5c	Uncharacterized protein. (955 aa)
	LOC108878191	Uncharacterized protein. (1762 aa)
	Unc5b	Unc-5 netrin receptor B. (943 aa)
	ENSLCAP00010003968	ANK_REP_REGION domain-containing protein. (691 aa)
	tradd	Death domain-containing protein. (293 aa)
	ENSLCAP00010005997	Ankyrin 1, erythrocytic b. (1821 aa)
	ENSLCAP00010007528	Ankyrin 3b. (1807 aa)
	thoc1	Death domain-containing protein. (683 aa)
	ENSLCAP00010012573	Unc-5 netrin receptor Da. (905 aa)
	ENSLCAP00010012586	Tumor necrosis factor receptor superfamily, member a. (419 aa)
	ENSLCAP00010014015	Unc-5 netrin receptor C. (956 aa)
	ENSLCAP00010014267	Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1. (984 aa)
	fas	Uncharacterized protein. (324 aa)
	igflr1	TNFR-Cys domain-containing protein. (333 aa)
	LOC108880505	Uncharacterized protein. (195 aa)
	ripk1	Uncharacterized protein. (684 aa)
	LOC108901215	Death domain-containing protein. (139 aa)
	myd88	Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response. (292 aa)
	unc5a	Uncharacterized protein. (903 aa)
	ENSLCAP00010024056	Tumor necrosis factor receptor superfamily, member 1a. (440 aa)
	LOC108891901	Uncharacterized protein. (396 aa)
	ENSLCAP00010028179	Ankyrin 3a. (3941 aa)
	ENSLCAP00010030143	P53-induced death domain protein 1. (910 aa)
	LOC108873448	Uncharacterized protein. (430 aa)
	ANK2	Ankyrin 2. (3875 aa)
	edaradd	Death domain-containing protein. (228 aa)
	ENSLCAP00010037926	Protein kinase domain-containing protein. (777 aa)
	irak3	Uncharacterized protein. (598 aa)
	ankdd1a	Uncharacterized protein. (508 aa)
	tnfrsf21	Uncharacterized protein. (694 aa)
	dapk1	Uncharacterized protein. (1452 aa)
	irak4	Protein kinase domain-containing protein. (458 aa)
	ENSLCAP00010052002	Zgc:174906. (225 aa)
	LOC108890530	Uncharacterized protein. (197 aa)
	UNC5D	Unc-5 netrin receptor D. (1038 aa)

Your Current Organism:

Lates calcarifer

NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSLCAP00010003968	ENSLCAP00010037926	ENSLCAP00010003968	ENSLCAP00010037926	ANK_REP_REGION domain-containing protein.	Protein kinase domain-containing protein.	0.468
ENSLCAP00010003968	myd88	ENSLCAP00010003968	ENSLCAP00010022073	ANK_REP_REGION domain-containing protein.	Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.	0.608
ENSLCAP00010012586	ENSLCAP00010024056	ENSLCAP00010012586	ENSLCAP00010024056	Tumor necrosis factor receptor superfamily, member a.	Tumor necrosis factor receptor superfamily, member 1a.	0.558
ENSLCAP00010012586	ENSLCAP00010030143	ENSLCAP00010012586	ENSLCAP00010030143	Tumor necrosis factor receptor superfamily, member a.	P53-induced death domain protein 1.	0.480
ENSLCAP00010012586	ENSLCAP00010058824	ENSLCAP00010012586	ENSLCAP00010058824	Tumor necrosis factor receptor superfamily, member a.	Hematopoietic death receptor.	0.785
ENSLCAP00010012586	LOC108880505	ENSLCAP00010012586	ENSLCAP00010018598	Tumor necrosis factor receptor superfamily, member a.	Uncharacterized protein.	0.958
ENSLCAP00010012586	fas	ENSLCAP00010012586	ENSLCAP00010015051	Tumor necrosis factor receptor superfamily, member a.	Uncharacterized protein.	0.812
ENSLCAP00010012586	ripk1	ENSLCAP00010012586	ENSLCAP00010020400	Tumor necrosis factor receptor superfamily, member a.	Uncharacterized protein.	0.869
ENSLCAP00010012586	tnfrsf21	ENSLCAP00010012586	ENSLCAP00010041909	Tumor necrosis factor receptor superfamily, member a.	Uncharacterized protein.	0.435
ENSLCAP00010012586	tradd	ENSLCAP00010012586	ENSLCAP00010004372	Tumor necrosis factor receptor superfamily, member a.	Death domain-containing protein.	0.830
ENSLCAP00010014267	ENSLCAP00010037926	ENSLCAP00010014267	ENSLCAP00010037926	Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1.	Protein kinase domain-containing protein.	0.468
ENSLCAP00010014267	myd88	ENSLCAP00010014267	ENSLCAP00010022073	Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1.	Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.	0.608
ENSLCAP00010024056	ENSLCAP00010012586	ENSLCAP00010024056	ENSLCAP00010012586	Tumor necrosis factor receptor superfamily, member 1a.	Tumor necrosis factor receptor superfamily, member a.	0.558
ENSLCAP00010024056	LOC108880505	ENSLCAP00010024056	ENSLCAP00010018598	Tumor necrosis factor receptor superfamily, member 1a.	Uncharacterized protein.	0.948
ENSLCAP00010024056	fas	ENSLCAP00010024056	ENSLCAP00010015051	Tumor necrosis factor receptor superfamily, member 1a.	Uncharacterized protein.	0.703
ENSLCAP00010024056	myd88	ENSLCAP00010024056	ENSLCAP00010022073	Tumor necrosis factor receptor superfamily, member 1a.	Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.	0.527
ENSLCAP00010024056	ripk1	ENSLCAP00010024056	ENSLCAP00010020400	Tumor necrosis factor receptor superfamily, member 1a.	Uncharacterized protein.	0.790
ENSLCAP00010024056	tnfrsf21	ENSLCAP00010024056	ENSLCAP00010041909	Tumor necrosis factor receptor superfamily, member 1a.	Uncharacterized protein.	0.435
ENSLCAP00010024056	tradd	ENSLCAP00010024056	ENSLCAP00010004372	Tumor necrosis factor receptor superfamily, member 1a.	Death domain-containing protein.	0.987
ENSLCAP00010030143	ENSLCAP00010012586	ENSLCAP00010030143	ENSLCAP00010012586	P53-induced death domain protein 1.	Tumor necrosis factor receptor superfamily, member a.	0.480