48 items (Lates calcarifer) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSLCAP00010055808	Thyroglobulin type-1 domain-containing protein. (129 aa)
	SLCO3A1	Solute carrier organic anion transporter family member. (737 aa)
	ENSLCAP00010057775	Uncharacterized protein. (203 aa)
	WFIKKN2	Uncharacterized protein. (575 aa)
	ENSLCAP00010001120	Kazal-like domain-containing protein. (65 aa)
	ENSLCAP00010001133	Uncharacterized protein. (464 aa)
	ENSLCAP00010001169	Follistatin a. (307 aa)
	slco4a1	Solute carrier organic anion transporter family member. (773 aa)
	smoc1	Uncharacterized protein. (505 aa)
	Fstl1	Follistatin-like 1b. (323 aa)
	LOC108877995	Uncharacterized protein. (464 aa)
	LOC108884778	Solute carrier organic anion transporter family member. (889 aa)
	spock3	Uncharacterized protein. (440 aa)
	ENSLCAP00010004411	SPARC-like 1. (461 aa)
	ENSLCAP00010005381	SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1. (354 aa)
	ENSLCAP00010005409	SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1. (418 aa)
	fstl3	Uncharacterized protein. (295 aa)
	LOC108875613	Uncharacterized protein. (594 aa)
	ENSLCAP00010007678	Agrin. (2015 aa)
	slco2b1	Solute carrier organic anion transporter family member. (658 aa)
	LOC108875394	Solute carrier organic anion transporter family member. (703 aa)
	tmeff1	Uncharacterized protein. (362 aa)
	ENSLCAP00010013697	Secreted protein, acidic, cysteine-rich (osteonectin). (334 aa)
	ENSLCAP00010015794	Uncharacterized protein. (333 aa)
	ENSLCAP00010015991	Follistatin-like 5. (835 aa)
	ENSLCAP00010017062	Kazal-like domain-containing protein. (318 aa)
	ENSLCAP00010018822	Kazal-like domain-containing protein. (55 aa)
	LOC108888406	Solute carrier organic anion transporter family member. (703 aa)
	LOC108897260	Uncharacterized protein. (419 aa)
	ENSLCAP00010021610	Kazal-like domain-containing protein. (104 aa)
	Slco2a1	Solute carrier organic anion transporter family member. (594 aa)
	LOC108892267	Uncharacterized protein; Belongs to the peptidase S1 family. (659 aa)
	ENSLCAP00010027567	Uncharacterized protein. (210 aa)
	ENSLCAP00010028049	HtrA serine peptidase 1b. (318 aa)
	fstl4	Uncharacterized protein. (855 aa)
	SLCO5A1	Solute carrier organic anion transporter family member. (865 aa)
	LOC108899847	Solute carrier organic anion transporter family member. (801 aa)
	wfikkn2	Uncharacterized protein. (578 aa)
	LOC108899832	Solute carrier organic anion transporter family member. (693 aa)
	ENSLCAP00010032639	Uncharacterized protein. (170 aa)
	ENSLCAP00010032939	HtrA serine peptidase 3a. (459 aa)
	reck	Uncharacterized protein. (959 aa)
	LOC108897393	Uncharacterized protein. (477 aa)
	spock2	Uncharacterized protein. (410 aa)
	ENSLCAP00010058349	Kazal-like domain-containing protein. (65 aa)
	SLCO1C1	Solute carrier organic anion transporter family member. (699 aa)
	smoc2	Uncharacterized protein. (430 aa)
	LOC108894178	Uncharacterized protein. (320 aa)

Your Current Organism:

Lates calcarifer

NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSLCAP00010001169	ENSLCAP00010013697	ENSLCAP00010001169	ENSLCAP00010013697	Follistatin a.	Secreted protein, acidic, cysteine-rich (osteonectin).	0.412
ENSLCAP00010005381	ENSLCAP00010013697	ENSLCAP00010005381	ENSLCAP00010013697	SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1.	Secreted protein, acidic, cysteine-rich (osteonectin).	0.424
ENSLCAP00010005409	ENSLCAP00010013697	ENSLCAP00010005409	ENSLCAP00010013697	SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1.	Secreted protein, acidic, cysteine-rich (osteonectin).	0.424
ENSLCAP00010013697	ENSLCAP00010001169	ENSLCAP00010013697	ENSLCAP00010001169	Secreted protein, acidic, cysteine-rich (osteonectin).	Follistatin a.	0.412
ENSLCAP00010013697	ENSLCAP00010005381	ENSLCAP00010013697	ENSLCAP00010005381	Secreted protein, acidic, cysteine-rich (osteonectin).	SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1.	0.424
ENSLCAP00010013697	ENSLCAP00010005409	ENSLCAP00010013697	ENSLCAP00010005409	Secreted protein, acidic, cysteine-rich (osteonectin).	SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1.	0.424
ENSLCAP00010013697	reck	ENSLCAP00010013697	ENSLCAP00010039254	Secreted protein, acidic, cysteine-rich (osteonectin).	Uncharacterized protein.	0.418
ENSLCAP00010013697	spock3	ENSLCAP00010013697	ENSLCAP00010003809	Secreted protein, acidic, cysteine-rich (osteonectin).	Uncharacterized protein.	0.424
ENSLCAP00010015991	fstl3	ENSLCAP00010015991	ENSLCAP00010006070	Follistatin-like 5.	Uncharacterized protein.	0.692
fstl3	ENSLCAP00010015991	ENSLCAP00010006070	ENSLCAP00010015991	Uncharacterized protein.	Follistatin-like 5.	0.692
fstl3	fstl4	ENSLCAP00010006070	ENSLCAP00010029032	Uncharacterized protein.	Uncharacterized protein.	0.658
fstl4	fstl3	ENSLCAP00010029032	ENSLCAP00010006070	Uncharacterized protein.	Uncharacterized protein.	0.658
reck	ENSLCAP00010013697	ENSLCAP00010039254	ENSLCAP00010013697	Uncharacterized protein.	Secreted protein, acidic, cysteine-rich (osteonectin).	0.418
spock3	ENSLCAP00010013697	ENSLCAP00010003809	ENSLCAP00010013697	Uncharacterized protein.	Secreted protein, acidic, cysteine-rich (osteonectin).	0.424