STRINGSTRING
ENSLCAP00010018377 ENSLCAP00010018377 LOC108883408 LOC108883408 ENSLCAP00010020668 ENSLCAP00010020668 ENSLCAP00010027829 ENSLCAP00010027829 ENSLCAP00010027060 ENSLCAP00010027060 smad3 smad3 kif13a kif13a ENSLCAP00010028677 ENSLCAP00010028677 ENSLCAP00010031432 ENSLCAP00010031432 LOC108878489 LOC108878489 irf7 irf7 ENSLCAP00010038489 ENSLCAP00010038489 chfr chfr rnf8 rnf8 ENSLCAP00010041471 ENSLCAP00010041471 Smad1 Smad1 LOC108900175 LOC108900175 LOC108885279 LOC108885279 mcrs1 mcrs1 tcf19 tcf19 ENSLCAP00010002339 ENSLCAP00010002339 aptx aptx snip1 snip1 nbn nbn rasip1 rasip1 ENSLCAP00010001596 ENSLCAP00010001596 LOC108884612 LOC108884612 aggf1 aggf1 LOC108887878 LOC108887878 LOC108887879 LOC108887879 irf5 irf5 ppp1r8 ppp1r8 ENSLCAP00010024456 ENSLCAP00010024456 kif16b kif16b smad6 smad6 LOC108886018 LOC108886018 LOC108884442 LOC108884442 LOC108897676 LOC108897676 ENSLCAP00010058331 ENSLCAP00010058331 ENSLCAP00010057287 ENSLCAP00010057287 slmap slmap LOC108878855 LOC108878855 smad9 smad9 ENSLCAP00010051639 ENSLCAP00010051639 LOC108879567 LOC108879567 slc4a1ap slc4a1ap ENSLCAP00010007481 ENSLCAP00010007481 irf8 irf8 phf12 phf12 Mdc1 Mdc1 Kif1b Kif1b LOC108896340 LOC108896340 smad7 smad7 ENSLCAP00010012986 ENSLCAP00010012986 ENSLCAP00010013550 ENSLCAP00010013550 SMAD4 SMAD4 LOC108874502 LOC108874502 ENSLCAP00010014729 ENSLCAP00010014729 Tifa Tifa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSLCAP00010018377Pleckstrin homology-like domain, family B, member 2b. (1388 aa)
LOC108883408IRF tryptophan pentad repeat domain-containing protein. (464 aa)
ENSLCAP00010020668Kinesin family member 14; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1183 aa)
ENSLCAP00010027829Polynucleotide kinase 3'-phosphatase. (578 aa)
ENSLCAP00010027060FHA domain-containing protein. (97 aa)
smad3Mothers against decapentaplegic homolog. (449 aa)
kif13aUncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1943 aa)
ENSLCAP00010028677Kinesin family member 1Ab; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1702 aa)
ENSLCAP00010031432Si:ch73-281f12.4. (1173 aa)
LOC108878489Mothers against decapentaplegic homolog. (467 aa)
irf7IRF tryptophan pentad repeat domain-containing protein. (441 aa)
ENSLCAP00010038489FHA domain-containing protein. (94 aa)
chfrUncharacterized protein. (633 aa)
rnf8E3 ubiquitin-protein ligase RNF8; E3 ubiquitin-protein ligase that plays a key role in DNA damage signaling via 2 distinct roles: by mediating the 'Lys-63'-linked ubiquitination of histones H2A and H2AX and promoting the recruitment of DNA repair proteins at double-strand breaks (DSBs) sites, and by catalyzing 'Lys-48'-linked ubiquitination to remove target proteins from DNA damage sites. Following DNA DSBs, it is recruited to the sites of damage by ATM-phosphorylated MDC1 and catalyzes the 'Lys-63'-linked ubiquitination of histones H2A and H2AX, thereby promoting the formation of TP53 [...] (523 aa)
ENSLCAP00010041471Afadin, adherens junction formation factor a. (1887 aa)
Smad1Mothers against decapentaplegic homolog. (462 aa)
LOC108900175IRF tryptophan pentad repeat domain-containing protein. (405 aa)
LOC108885279Uncharacterized protein. (616 aa)
mcrs1FHA domain-containing protein. (466 aa)
tcf19FHA domain-containing protein. (562 aa)
ENSLCAP00010002339FHA domain-containing protein. (184 aa)
aptxHIT domain-containing protein. (333 aa)
snip1FHA domain-containing protein. (363 aa)
nbnFHA domain-containing protein. (868 aa)
rasip1Uncharacterized protein. (998 aa)
ENSLCAP00010001596Mothers against decapentaplegic homolog. (531 aa)
LOC108884612Uncharacterized protein. (1257 aa)
aggf1Uncharacterized protein. (742 aa)
LOC108887878Mothers against decapentaplegic homolog. (452 aa)
LOC108887879Mothers against decapentaplegic homolog. (506 aa)
irf5IRF tryptophan pentad repeat domain-containing protein. (487 aa)
ppp1r8FHA domain-containing protein. (349 aa)
ENSLCAP00010024456Centrosomal protein 170B. (1271 aa)
kif16bKinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1505 aa)
smad6Mothers against decapentaplegic homolog. (491 aa)
LOC108886018Mothers against decapentaplegic homolog. (474 aa)
LOC108884442IRF tryptophan pentad repeat domain-containing protein. (466 aa)
LOC108897676Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1813 aa)
ENSLCAP00010058331Interferon regulatory factor 9. (403 aa)
ENSLCAP00010057287Interferon regulatory factor 6. (479 aa)
slmapFHA domain-containing protein. (900 aa)
LOC108878855Mothers against decapentaplegic homolog. (471 aa)
smad9Mothers against decapentaplegic homolog. (469 aa)
ENSLCAP00010051639Uncharacterized protein. (521 aa)
LOC108879567IRF tryptophan pentad repeat domain-containing protein. (447 aa)
slc4a1apFHA domain-containing protein. (796 aa)
ENSLCAP00010007481FHA domain-containing protein. (124 aa)
irf8IRF tryptophan pentad repeat domain-containing protein. (420 aa)
phf12Uncharacterized protein. (1031 aa)
Mdc1Uncharacterized protein. (2161 aa)
Kif1bKinesin family member 1B; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1818 aa)
LOC108896340Mothers against decapentaplegic homolog. (616 aa)
smad7Mothers against decapentaplegic homolog. (376 aa)
ENSLCAP00010012986Kinesin family member 13Bb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1691 aa)
ENSLCAP00010013550Pleckstrin homology-like domain, family B, member 1b. (1573 aa)
SMAD4Mothers against decapentaplegic homolog. (524 aa)
LOC108874502Uncharacterized protein. (617 aa)
ENSLCAP00010014729Forkhead box K1. (557 aa)
TifaUncharacterized protein. (98 aa)
Your Current Organism:
Lates calcarifer
NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch
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