17 items (Lates calcarifer) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSLCAP00010008403	Uncharacterized protein; Belongs to the peptidase C14A family. (480 aa)
	casp9	Uncharacterized protein; Belongs to the peptidase C14A family. (457 aa)
	ENSLCAP00010059112	Caspase 8, apoptosis-related cysteine peptidase, like 2; Belongs to the peptidase C14A family. (647 aa)
	CASP3	Caspase 3, apoptosis-related cysteine peptidase b; Belongs to the peptidase C14A family. (259 aa)
	ENSLCAP00010058119	MALT paracaspase 2. (565 aa)
	LOC108895937	Uncharacterized protein; Belongs to the peptidase C14A family. (273 aa)
	ENSLCAP00010051261	Uncharacterized protein; Belongs to the peptidase C14A family. (273 aa)
	cflar	Uncharacterized protein; Belongs to the peptidase C14A family. (516 aa)
	ENSLCAP00010037861	Caspase 3, apoptosis-related cysteine peptidase a; Belongs to the peptidase C14A family. (279 aa)
	ENSLCAP00010036940	MALT paracaspase 1. (806 aa)
	casp2	Uncharacterized protein; Belongs to the peptidase C14A family. (468 aa)
	ENSLCAP00010015606	Uncharacterized protein; Belongs to the peptidase C14A family. (395 aa)
	ENSLCAP00010015583	Uncharacterized protein; Belongs to the peptidase C14A family. (384 aa)
	casp6	Uncharacterized protein; Belongs to the peptidase C14A family. (301 aa)
	LOC108875423	Uncharacterized protein. (654 aa)
	casp7	Uncharacterized protein; Belongs to the peptidase C14A family. (316 aa)
	Catip	Uncharacterized protein; Belongs to the peptidase C14A family. (459 aa)

Your Current Organism:

Lates calcarifer

NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CASP3	Catip	ENSLCAP00010058548	ENSLCAP00010008252	Caspase 3, apoptosis-related cysteine peptidase b; Belongs to the peptidase C14A family.	Uncharacterized protein; Belongs to the peptidase C14A family.	0.503
CASP3	ENSLCAP00010008403	ENSLCAP00010058548	ENSLCAP00010008403	Caspase 3, apoptosis-related cysteine peptidase b; Belongs to the peptidase C14A family.	Uncharacterized protein; Belongs to the peptidase C14A family.	0.590
CASP3	ENSLCAP00010037861	ENSLCAP00010058548	ENSLCAP00010037861	Caspase 3, apoptosis-related cysteine peptidase b; Belongs to the peptidase C14A family.	Caspase 3, apoptosis-related cysteine peptidase a; Belongs to the peptidase C14A family.	0.902
CASP3	ENSLCAP00010059112	ENSLCAP00010058548	ENSLCAP00010059112	Caspase 3, apoptosis-related cysteine peptidase b; Belongs to the peptidase C14A family.	Caspase 8, apoptosis-related cysteine peptidase, like 2; Belongs to the peptidase C14A family.	0.958
CASP3	casp2	ENSLCAP00010058548	ENSLCAP00010021664	Caspase 3, apoptosis-related cysteine peptidase b; Belongs to the peptidase C14A family.	Uncharacterized protein; Belongs to the peptidase C14A family.	0.519
CASP3	casp9	ENSLCAP00010058548	ENSLCAP00010059818	Caspase 3, apoptosis-related cysteine peptidase b; Belongs to the peptidase C14A family.	Uncharacterized protein; Belongs to the peptidase C14A family.	0.973
Catip	CASP3	ENSLCAP00010008252	ENSLCAP00010058548	Uncharacterized protein; Belongs to the peptidase C14A family.	Caspase 3, apoptosis-related cysteine peptidase b; Belongs to the peptidase C14A family.	0.503
Catip	ENSLCAP00010036940	ENSLCAP00010008252	ENSLCAP00010036940	Uncharacterized protein; Belongs to the peptidase C14A family.	MALT paracaspase 1.	0.594
Catip	ENSLCAP00010037861	ENSLCAP00010008252	ENSLCAP00010037861	Uncharacterized protein; Belongs to the peptidase C14A family.	Caspase 3, apoptosis-related cysteine peptidase a; Belongs to the peptidase C14A family.	0.505
Catip	ENSLCAP00010051261	ENSLCAP00010008252	ENSLCAP00010051261	Uncharacterized protein; Belongs to the peptidase C14A family.	Uncharacterized protein; Belongs to the peptidase C14A family.	0.521
Catip	ENSLCAP00010058119	ENSLCAP00010008252	ENSLCAP00010058119	Uncharacterized protein; Belongs to the peptidase C14A family.	MALT paracaspase 2.	0.594
Catip	LOC108875423	ENSLCAP00010008252	ENSLCAP00010010597	Uncharacterized protein; Belongs to the peptidase C14A family.	Uncharacterized protein.	0.594
Catip	LOC108895937	ENSLCAP00010008252	ENSLCAP00010051266	Uncharacterized protein; Belongs to the peptidase C14A family.	Uncharacterized protein; Belongs to the peptidase C14A family.	0.518
Catip	casp2	ENSLCAP00010008252	ENSLCAP00010021664	Uncharacterized protein; Belongs to the peptidase C14A family.	Uncharacterized protein; Belongs to the peptidase C14A family.	0.482
Catip	casp6	ENSLCAP00010008252	ENSLCAP00010010915	Uncharacterized protein; Belongs to the peptidase C14A family.	Uncharacterized protein; Belongs to the peptidase C14A family.	0.482
Catip	casp7	ENSLCAP00010008252	ENSLCAP00010008781	Uncharacterized protein; Belongs to the peptidase C14A family.	Uncharacterized protein; Belongs to the peptidase C14A family.	0.482
Catip	casp9	ENSLCAP00010008252	ENSLCAP00010059818	Uncharacterized protein; Belongs to the peptidase C14A family.	Uncharacterized protein; Belongs to the peptidase C14A family.	0.555
Catip	cflar	ENSLCAP00010008252	ENSLCAP00010048611	Uncharacterized protein; Belongs to the peptidase C14A family.	Uncharacterized protein; Belongs to the peptidase C14A family.	0.911
ENSLCAP00010008403	CASP3	ENSLCAP00010008403	ENSLCAP00010058548	Uncharacterized protein; Belongs to the peptidase C14A family.	Caspase 3, apoptosis-related cysteine peptidase b; Belongs to the peptidase C14A family.	0.590
ENSLCAP00010008403	ENSLCAP00010015583	ENSLCAP00010008403	ENSLCAP00010015583	Uncharacterized protein; Belongs to the peptidase C14A family.	Uncharacterized protein; Belongs to the peptidase C14A family.	0.438