(30 nodes) EGF-like, conserved site network (Lates calcarifer)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSLCAP00010047010	Slit homolog 3 (Drosophila). (1454 aa)
	ENSLCAP00010041987	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (2811 aa)
	ENSLCAP00010038396	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (715 aa)
	ENSLCAP00010038273	Uncharacterized protein. (1500 aa)
	ENSLCAP00010036905	Uncharacterized protein. (2347 aa)
	LOC108875238	Uncharacterized protein. (2519 aa)
	ENSLCAP00010036030	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (1035 aa)
	CRB2	Uncharacterized protein. (1470 aa)
	megf11	Uncharacterized protein. (1097 aa)
	ENSLCAP00010023067	Sushi, nidogen and EGF-like domains 1. (1339 aa)
	ENSLCAP00010022649	Si:dkey-22o22.2; Cadherins are calcium-dependent cell adhesion proteins. (2785 aa)
	ENSLCAP00010015325	Slit homolog 1a (Drosophila). (1539 aa)
	Crb1	Uncharacterized protein. (990 aa)
	ENSLCAP00010013357	Delta-like 2 homolog (Drosophila). (343 aa)
	MEGF11	Uncharacterized protein. (1141 aa)
	jag1	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (1223 aa)
	ENSLCAP00010003883	Notch 1a. (857 aa)
	ENSLCAP00010003016	Platelet endothelial aggregation receptor 1. (958 aa)
	Megf10	Multiple EGF-like-domains 10. (1083 aa)
	crb2	Uncharacterized protein. (1463 aa)
	ENSLCAP00010056443	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (747 aa)
	LOC108897683	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (2966 aa)
	ENSLCAP00010055704	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (1226 aa)
	ENSLCAP00010055479	Notch 3. (2385 aa)
	LOC108877344	Uncharacterized protein. (2503 aa)
	LOC108887227	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (1263 aa)
	ENSLCAP00010052465	Uncharacterized protein. (670 aa)
	ENSLCAP00010051264	Fibrillin 2b. (2720 aa)
	dll3	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (683 aa)
	DLK1	Delta like non-canonical Notch ligand 1. (293 aa)

Your Current Organism:

Lates calcarifer

NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DLK1	ENSLCAP00010003883	ENSLCAP00010044814	ENSLCAP00010003883	Delta like non-canonical Notch ligand 1.	Notch 1a.	0.699
DLK1	LOC108875238	ENSLCAP00010044814	ENSLCAP00010036565	Delta like non-canonical Notch ligand 1.	Uncharacterized protein.	0.698
DLK1	LOC108877344	ENSLCAP00010044814	ENSLCAP00010054247	Delta like non-canonical Notch ligand 1.	Uncharacterized protein.	0.505
ENSLCAP00010003016	MEGF11	ENSLCAP00010003016	ENSLCAP00010009769	Platelet endothelial aggregation receptor 1.	Uncharacterized protein.	0.400
ENSLCAP00010003016	megf11	ENSLCAP00010003016	ENSLCAP00010025151	Platelet endothelial aggregation receptor 1.	Uncharacterized protein.	0.400
ENSLCAP00010003883	DLK1	ENSLCAP00010003883	ENSLCAP00010044814	Notch 1a.	Delta like non-canonical Notch ligand 1.	0.699
ENSLCAP00010003883	ENSLCAP00010036030	ENSLCAP00010003883	ENSLCAP00010036030	Notch 1a.	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	0.745
ENSLCAP00010003883	ENSLCAP00010038396	ENSLCAP00010003883	ENSLCAP00010038396	Notch 1a.	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	0.894
ENSLCAP00010003883	ENSLCAP00010055704	ENSLCAP00010003883	ENSLCAP00010055704	Notch 1a.	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	0.917
ENSLCAP00010003883	ENSLCAP00010056443	ENSLCAP00010003883	ENSLCAP00010056443	Notch 1a.	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	0.711
ENSLCAP00010003883	LOC108887227	ENSLCAP00010003883	ENSLCAP00010053522	Notch 1a.	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	0.907
ENSLCAP00010003883	dll3	ENSLCAP00010003883	ENSLCAP00010050363	Notch 1a.	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	0.894
ENSLCAP00010003883	jag1	ENSLCAP00010003883	ENSLCAP00010008012	Notch 1a.	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	0.918
ENSLCAP00010036030	ENSLCAP00010003883	ENSLCAP00010036030	ENSLCAP00010003883	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	Notch 1a.	0.745
ENSLCAP00010036030	ENSLCAP00010036905	ENSLCAP00010036030	ENSLCAP00010036905	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	Uncharacterized protein.	0.487
ENSLCAP00010036030	ENSLCAP00010055479	ENSLCAP00010036030	ENSLCAP00010055479	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	Notch 3.	0.487
ENSLCAP00010036030	LOC108875238	ENSLCAP00010036030	ENSLCAP00010036565	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	Uncharacterized protein.	0.745
ENSLCAP00010036030	LOC108877344	ENSLCAP00010036030	ENSLCAP00010054247	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	Uncharacterized protein.	0.487
ENSLCAP00010036905	ENSLCAP00010036030	ENSLCAP00010036905	ENSLCAP00010036030	Uncharacterized protein.	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	0.487
ENSLCAP00010036905	ENSLCAP00010038396	ENSLCAP00010036905	ENSLCAP00010038396	Uncharacterized protein.	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	0.434