STRINGSTRING
ENSLCAP00010001596 ENSLCAP00010001596 LOC108887878 LOC108887878 smad9 smad9 LOC108878855 LOC108878855 ENSLCAP00010057287 ENSLCAP00010057287 ENSLCAP00010058331 ENSLCAP00010058331 LOC108884442 LOC108884442 LOC108886018 LOC108886018 LOC108887879 LOC108887879 irf8 irf8 LOC108896340 LOC108896340 smad7 smad7 SMAD4 SMAD4 LOC108883408 LOC108883408 irf7 irf7 LOC108879567 LOC108879567 LOC108878489 LOC108878489 smad3 smad3 smad6 smad6 selenbp1 selenbp1 irf5 irf5 LOC108900175 LOC108900175 Smad1 Smad1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSLCAP00010001596Mothers against decapentaplegic homolog. (531 aa)
LOC108887878Mothers against decapentaplegic homolog. (452 aa)
smad9Mothers against decapentaplegic homolog. (469 aa)
LOC108878855Mothers against decapentaplegic homolog. (471 aa)
ENSLCAP00010057287Interferon regulatory factor 6. (479 aa)
ENSLCAP00010058331Interferon regulatory factor 9. (403 aa)
LOC108884442IRF tryptophan pentad repeat domain-containing protein. (466 aa)
LOC108886018Mothers against decapentaplegic homolog. (474 aa)
LOC108887879Mothers against decapentaplegic homolog. (506 aa)
irf8IRF tryptophan pentad repeat domain-containing protein. (420 aa)
LOC108896340Mothers against decapentaplegic homolog. (616 aa)
smad7Mothers against decapentaplegic homolog. (376 aa)
SMAD4Mothers against decapentaplegic homolog. (524 aa)
LOC108883408IRF tryptophan pentad repeat domain-containing protein. (464 aa)
irf7IRF tryptophan pentad repeat domain-containing protein. (441 aa)
LOC108879567IRF tryptophan pentad repeat domain-containing protein. (447 aa)
LOC108878489Mothers against decapentaplegic homolog. (467 aa)
smad3Mothers against decapentaplegic homolog. (449 aa)
smad6Mothers against decapentaplegic homolog. (491 aa)
selenbp1Uncharacterized protein. (541 aa)
irf5IRF tryptophan pentad repeat domain-containing protein. (487 aa)
LOC108900175IRF tryptophan pentad repeat domain-containing protein. (405 aa)
Smad1Mothers against decapentaplegic homolog. (462 aa)
Your Current Organism:
Lates calcarifer
NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch
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