STRINGSTRING
LOC108895830 LOC108895830 ENSLCAP00010000629 ENSLCAP00010000629 ENSLCAP00010002465 ENSLCAP00010002465 PDGFA PDGFA ENSLCAP00010004510 ENSLCAP00010004510 ENSLCAP00010004949 ENSLCAP00010004949 ENSLCAP00010005369 ENSLCAP00010005369 tgfb2 tgfb2 LOC108886096 LOC108886096 LOC108879436 LOC108879436 ENSLCAP00010007880 ENSLCAP00010007880 ENSLCAP00010008405 ENSLCAP00010008405 LOC108894339 LOC108894339 NTF4 NTF4 LOC108895789 LOC108895789 LOC108873578 LOC108873578 ENSLCAP00010011334 ENSLCAP00010011334 LOC108878055 LOC108878055 LOC108878075 LOC108878075 ENSLCAP00010060148 ENSLCAP00010060148 LOC108887165 LOC108887165 sost sost Bmp5 Bmp5 ENSLCAP00010055837 ENSLCAP00010055837 ntf3 ntf3 LOC108898929 LOC108898929 Grem1 Grem1 LOC108875823 LOC108875823 ENSLCAP00010053757 ENSLCAP00010053757 bmp15 bmp15 ENSLCAP00010052472 ENSLCAP00010052472 mstn mstn LOC108883691 LOC108883691 ENSLCAP00010048218 ENSLCAP00010048218 ENSLCAP00010048214 ENSLCAP00010048214 pdgfc pdgfc Bmp8a Bmp8a pdgfd pdgfd ENSLCAP00010046646 ENSLCAP00010046646 gdf15 gdf15 ENSLCAP00010046009 ENSLCAP00010046009 LOC108892841 LOC108892841 cga cga ENSLCAP00010045556 ENSLCAP00010045556 inha inha LOC108892573 LOC108892573 ENSLCAP00010044822 ENSLCAP00010044822 ENSLCAP00010043543 ENSLCAP00010043543 nodal nodal LOC108872574 LOC108872574 Vegfb Vegfb tgfb3 tgfb3 bdnf bdnf bmp7 bmp7 LOC108873145 LOC108873145 ENSLCAP00010040901 ENSLCAP00010040901 LOC108887820 LOC108887820 NBL1 NBL1 ENSLCAP00010040003 ENSLCAP00010040003 ENSLCAP00010039952 ENSLCAP00010039952 gpha2 gpha2 LOC108888778 LOC108888778 ENSLCAP00010038402 ENSLCAP00010038402 LOC108887630 LOC108887630 PSPN PSPN grem2 grem2 ndp ndp NRTN NRTN ENSLCAP00010036563 ENSLCAP00010036563 bmp4 bmp4 bmp3 bmp3 LOC108889169 LOC108889169 INHBC INHBC LOC108887645 LOC108887645 bmp10 bmp10 nog nog gdf9 gdf9 vegfc vegfc GREM1 GREM1 bmp2 bmp2 ENSLCAP00010029218 ENSLCAP00010029218 LOC108896919 LOC108896919 il17d il17d ENSLCAP00010025014 ENSLCAP00010025014 gdnf gdnf Bmp6 Bmp6 ENSLCAP00010017979 ENSLCAP00010017979 TGFB3 TGFB3 LOC108896394 LOC108896394 LOC108894674 LOC108894674 Gphb5 Gphb5 LOC108876160 LOC108876160 LOC108894156 LOC108894156 LOC108894154 LOC108894154 inhba inhba LOC108874440 LOC108874440 LOC108888971 LOC108888971 ENSLCAP00010013669 ENSLCAP00010013669 vegfd vegfd sostdc1 sostdc1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC108895830Uncharacterized protein. (162 aa)
ENSLCAP00010000629Noggin 2. (194 aa)
ENSLCAP00010002465Nodal-related 1. (176 aa)
PDGFAPlatelet derived growth factor subunit A. (161 aa)
ENSLCAP00010004510Luteinizing hormone, beta polypeptide. (185 aa)
ENSLCAP00010004949Growth differentiation factor 5. (447 aa)
ENSLCAP00010005369TGF_BETA_2 domain-containing protein. (379 aa)
tgfb2Transforming growth factor beta; Belongs to the TGF-beta family. (444 aa)
LOC108886096PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family. (201 aa)
LOC108879436Uncharacterized protein. (172 aa)
ENSLCAP00010007880TGF_BETA_2 domain-containing protein. (470 aa)
ENSLCAP00010008405TGF_BETA_2 domain-containing protein. (172 aa)
LOC108894339Uncharacterized protein. (172 aa)
NTF4Neurotrophin 4; Belongs to the NGF-beta family. (141 aa)
LOC108895789Left-right determination factor. (359 aa)
LOC108873578Cys_knot domain-containing protein. (158 aa)
ENSLCAP00010011334Nerve growth factor b (beta polypeptide); Belongs to the NGF-beta family. (132 aa)
LOC108878055TGF_BETA_2 domain-containing protein. (267 aa)
LOC108878075TGF_BETA_2 domain-containing protein. (414 aa)
ENSLCAP00010060148Platelet-derived growth factor alpha polypeptide a; Belongs to the PDGF/VEGF growth factor family. (229 aa)
LOC108887165PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family. (587 aa)
sostCTCK domain-containing protein. (219 aa)
Bmp5Bone morphogenetic protein 5. (460 aa)
ENSLCAP00010055837CTCK domain-containing protein. (105 aa)
ntf3Neurotrophin-3; Seems to promote the survival of visceral and proprioceptive sensory neurons; Belongs to the NGF-beta family. (300 aa)
LOC108898929TGF_BETA_2 domain-containing protein. (389 aa)
Grem1Gremlin 1a, DAN family BMP antagonist. (176 aa)
LOC108875823CTCK domain-containing protein. (256 aa)
ENSLCAP00010053757Anti-Mullerian hormone. (480 aa)
bmp15TGF_BETA_2 domain-containing protein. (432 aa)
ENSLCAP00010052472Uncharacterized protein. (139 aa)
mstnTGF_BETA_2 domain-containing protein. (376 aa)
LOC108883691TGF_BETA_2 domain-containing protein. (296 aa)
ENSLCAP00010048218Growth differentiation factor 10b. (270 aa)
ENSLCAP00010048214Growth differentiation factor 2. (403 aa)
pdgfcUncharacterized protein; Belongs to the PDGF/VEGF growth factor family. (342 aa)
Bmp8aBone morphogenetic protein 8a. (443 aa)
pdgfdUncharacterized protein. (377 aa)
ENSLCAP00010046646CTCK domain-containing protein. (83 aa)
gdf15TGF_BETA_2 domain-containing protein. (403 aa)
ENSLCAP00010046009Uncharacterized protein. (212 aa)
LOC108892841PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family. (407 aa)
cgaGlycoprotein hormones alpha chain; Belongs to the glycoprotein hormones subunit alpha family. (132 aa)
ENSLCAP00010045556Bone morphogenetic protein 7a. (415 aa)
inhaInhibin alpha chain; Inhibins and activins inhibit and activate, respectively, the secretion of follitropin by the pituitary gland. Inhibins/activins are involved in regulating a number of diverse functions such as hypothalamic and pituitary hormone secretion, gonadal hormone secretion, germ cell development and maturation, erythroid differentiation, insulin secretion, nerve cell survival, embryonic axial development or bone growth, depending on their subunit composition; Belongs to the TGF-beta family. (349 aa)
LOC108892573PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family. (207 aa)
ENSLCAP00010044822Uncharacterized protein. (190 aa)
ENSLCAP00010043543Inhibin subunit beta Aa. (398 aa)
nodalTGF_BETA_2 domain-containing protein. (398 aa)
LOC108872574Transforming growth factor beta; Belongs to the TGF-beta family. (420 aa)
VegfbPDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family. (147 aa)
tgfb3Transforming growth factor beta; Belongs to the TGF-beta family. (405 aa)
bdnfBrain-derived neurotrophic factor; Promotes the survival of neuronal populations that are all located either in the central nervous system or directly connected to it; Belongs to the NGF-beta family. (322 aa)
bmp7TGF_BETA_2 domain-containing protein. (427 aa)
LOC108873145Myostatin-2. (359 aa)
ENSLCAP00010040901Bone morphogenetic protein 16. (394 aa)
LOC108887820Cys_knot domain-containing protein. (145 aa)
NBL1NBL1, DAN family BMP antagonist. (172 aa)
ENSLCAP00010040003Cys_knot domain-containing protein. (129 aa)
ENSLCAP00010039952Nerve growth factor a (beta polypeptide); Belongs to the NGF-beta family. (235 aa)
gpha2Glycoprotein hormones alpha chain; Belongs to the glycoprotein hormones subunit alpha family. (136 aa)
LOC108888778Cys_knot domain-containing protein. (129 aa)
ENSLCAP00010038402Vascular endothelial growth factor Ab; Belongs to the PDGF/VEGF growth factor family. (147 aa)
LOC108887630TGF_BETA_2 domain-containing protein. (400 aa)
PSPNTGF_BETA_2 domain-containing protein. (177 aa)
grem2CTCK domain-containing protein. (192 aa)
ndpCTCK domain-containing protein. (143 aa)
NRTNTGF_BETA_2 domain-containing protein. (253 aa)
ENSLCAP00010036563Anti-dorsalizing morphogenic protein. (375 aa)
bmp4TGF_BETA_2 domain-containing protein. (457 aa)
bmp3Bone morphogenetic protein 3; Belongs to the TGF-beta family. (464 aa)
LOC108889169TGF_BETA_2 domain-containing protein. (396 aa)
INHBCInhibin subunit beta C. (368 aa)
LOC108887645TGF_BETA_2 domain-containing protein. (453 aa)
bmp10TGF_BETA_2 domain-containing protein. (491 aa)
nogNoggin; Belongs to the noggin family. (225 aa)
gdf9TGF_BETA_2 domain-containing protein. (435 aa)
vegfcPDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family. (422 aa)
GREM1Gremlin. (182 aa)
bmp2TGF_BETA_2 domain-containing protein. (417 aa)
ENSLCAP00010029218Growth differentiation factor 6b. (391 aa)
LOC108896919PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family. (169 aa)
il17dUncharacterized protein. (211 aa)
ENSLCAP00010025014Growth differentiation factor 3. (345 aa)
gdnfGlial cell line-derived neurotrophic factor; Neurotrophic factor that enhances survival and morphological differentiation of dopaminergic neurons and increases their high- affinity dopamine uptake. (257 aa)
Bmp6Bone morphogenetic protein 6. (242 aa)
ENSLCAP00010017979CTCK domain-containing protein. (99 aa)
TGFB3Transforming growth factor beta; Belongs to the TGF-beta family. (408 aa)
LOC108896394CTCK domain-containing protein. (206 aa)
LOC108894674CTCK domain-containing protein. (105 aa)
Gphb5Glycoprotein hormone beta 5. (137 aa)
LOC108876160Transforming growth factor beta; Belongs to the TGF-beta family. (386 aa)
LOC108894156Uncharacterized protein. (146 aa)
LOC108894154Uncharacterized protein. (161 aa)
inhbaTGF_BETA_2 domain-containing protein. (400 aa)
LOC108874440Noggin; Belongs to the noggin family. (222 aa)
LOC108888971TGF_BETA_2 domain-containing protein. (463 aa)
ENSLCAP00010013669Artemin a. (149 aa)
vegfdPDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family. (503 aa)
sostdc1CTCK domain-containing protein. (217 aa)
Your Current Organism:
Lates calcarifer
NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch
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