68 items (Lates calcarifer) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC108877809	Uncharacterized protein. (393 aa)
	ENSLCAP00010039477	Si:ch73-74h11.1; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. (745 aa)
	ENSLCAP00010039697	Uncharacterized protein. (419 aa)
	LOC108873152	DUF4203 domain-containing protein. (440 aa)
	ENSLCAP00010042260	Serine/threonine protein kinase 26. (393 aa)
	ENSLCAP00010043062	Microtubule-associated protein. (311 aa)
	LOC108880424	DUF4203 domain-containing protein. (388 aa)
	ENSLCAP00010046200	APC_N_CC domain-containing protein. (236 aa)
	ENSLCAP00010045479	Microtubule-associated protein. (377 aa)
	ENSLCAP00010045472	Uncharacterized protein. (1347 aa)
	vim	IF rod domain-containing protein; Belongs to the intermediate filament family. (460 aa)
	ENSLCAP00010047396	Uncharacterized protein. (669 aa)
	ENSLCAP00010044598	DUF4203 domain-containing protein. (322 aa)
	ENSLCAP00010044348	Uncharacterized protein. (365 aa)
	lmnb1	Uncharacterized protein; Belongs to the intermediate filament family. (588 aa)
	LOC108881522	Protein kinase domain-containing protein. (463 aa)
	ENSLCAP00010058779	Cadherin 31; Cadherins are calcium-dependent cell adhesion proteins. (824 aa)
	LOC108878427	Uncharacterized protein. (395 aa)
	ENSLCAP00010057483	IF rod domain-containing protein; Belongs to the intermediate filament family. (82 aa)
	bcap31	Uncharacterized protein. (246 aa)
	LOC108898943	Uncharacterized protein. (522 aa)
	fnta	Uncharacterized protein. (376 aa)
	tjp2	Uncharacterized protein; Belongs to the MAGUK family. (1264 aa)
	LOC108889024	Uncharacterized protein; Belongs to the MAGUK family. (1303 aa)
	Stk25	Serine/threonine kinase 25b. (425 aa)
	LOC108873033	Microtubule-associated protein. (1439 aa)
	LOC108883701	Uncharacterized protein. (726 aa)
	gsn	Uncharacterized protein. (790 aa)
	ENSLCAP00010048403	Phorbol-ester/DAG-type domain-containing protein. (215 aa)
	ENSLCAP00010048398	Non-specific serine/threonine protein kinase. (290 aa)
	LOC108903047	SAP domain-containing protein. (1324 aa)
	LOC108899555	Uncharacterized protein. (842 aa)
	Lmna	Lamin A; Belongs to the intermediate filament family. (671 aa)
	LOC108898240	Uncharacterized protein. (364 aa)
	rock1	Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity. (1364 aa)
	ENSLCAP00010008403	Uncharacterized protein; Belongs to the peptidase C14A family. (480 aa)
	casp7	Uncharacterized protein; Belongs to the peptidase C14A family. (316 aa)
	ENSLCAP00010009450	APC_N_CC domain-containing protein. (163 aa)
	Scin	Scinderin. (763 aa)
	casp6	Uncharacterized protein; Belongs to the peptidase C14A family. (301 aa)
	ENSLCAP00010011478	Adducin 1 (alpha). (821 aa)
	ENSLCAP00010011531	Plakophilin 1b. (742 aa)
	Apc	APC_N_CC domain-containing protein. (233 aa)
	LOC108883933	SAP domain-containing protein. (1724 aa)
	ENSLCAP00010016110	Capping protein (actin filament), gelsolin-like b. (352 aa)
	LOC108880527	Uncharacterized protein; Belongs to the intermediate filament family. (595 aa)
	LOC108878964	Uncharacterized protein. (763 aa)
	ENSLCAP00010017458	Tight junction protein 1a; Belongs to the MAGUK family. (1731 aa)
	ENSLCAP00010017799	Lamin B2; Belongs to the intermediate filament family. (570 aa)
	LOC108876659	Uncharacterized protein; Belongs to the MAGUK family. (1966 aa)
	bcap29	Uncharacterized protein. (241 aa)
	prkcq	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (720 aa)
	LOC108893387	Uncharacterized protein. (641 aa)
	gas2	Uncharacterized protein. (337 aa)
	LOC108879018	Uncharacterized protein; Belongs to the MAGUK family. (1342 aa)
	LOC108883426	Uncharacterized protein; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. (1099 aa)
	ENSLCAP00010026372	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (771 aa)
	ENSLCAP00010027384	Adenomatosis polyposis coli 2. (2057 aa)
	ENSLCAP00010028147	Spectrin alpha, non-erythrocytic 1. (2399 aa)
	LOC108880201	Protein kinase domain-containing protein. (432 aa)
	ENSLCAP00010032888	Microtubule-associated protein. (215 aa)
	ENSLCAP00010033594	Uncharacterized protein; Belongs to the intermediate filament family. (606 aa)
	ENSLCAP00010035178	DUF4203 domain-containing protein. (249 aa)
	ENSLCAP00010036351	SATB homeobox 1a. (724 aa)
	ENSLCAP00010036359	ULD domain-containing protein. (119 aa)
	ctnnb1	Uncharacterized protein. (796 aa)
	LOC108881487	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (700 aa)
	LOC108900676	Uncharacterized protein; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. (1175 aa)

Your Current Organism:

Lates calcarifer

NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Apc	ENSLCAP00010027384	ENSLCAP00010013206	ENSLCAP00010027384	APC_N_CC domain-containing protein.	Adenomatosis polyposis coli 2.	0.989
Apc	ctnnb1	ENSLCAP00010013206	ENSLCAP00010036719	APC_N_CC domain-containing protein.	Uncharacterized protein.	0.991
ENSLCAP00010008403	LOC108893387	ENSLCAP00010008403	ENSLCAP00010021098	Uncharacterized protein; Belongs to the peptidase C14A family.	Uncharacterized protein.	0.466
ENSLCAP00010008403	bcap29	ENSLCAP00010008403	ENSLCAP00010019015	Uncharacterized protein; Belongs to the peptidase C14A family.	Uncharacterized protein.	0.711
ENSLCAP00010008403	bcap31	ENSLCAP00010008403	ENSLCAP00010056059	Uncharacterized protein; Belongs to the peptidase C14A family.	Uncharacterized protein.	0.711
ENSLCAP00010008403	casp6	ENSLCAP00010008403	ENSLCAP00010010915	Uncharacterized protein; Belongs to the peptidase C14A family.	Uncharacterized protein; Belongs to the peptidase C14A family.	0.692
ENSLCAP00010008403	casp7	ENSLCAP00010008403	ENSLCAP00010008781	Uncharacterized protein; Belongs to the peptidase C14A family.	Uncharacterized protein; Belongs to the peptidase C14A family.	0.570
ENSLCAP00010008403	vim	ENSLCAP00010008403	ENSLCAP00010045458	Uncharacterized protein; Belongs to the peptidase C14A family.	IF rod domain-containing protein; Belongs to the intermediate filament family.	0.461
ENSLCAP00010009450	ENSLCAP00010027384	ENSLCAP00010009450	ENSLCAP00010027384	APC_N_CC domain-containing protein.	Adenomatosis polyposis coli 2.	0.898
ENSLCAP00010009450	ctnnb1	ENSLCAP00010009450	ENSLCAP00010036719	APC_N_CC domain-containing protein.	Uncharacterized protein.	0.922
ENSLCAP00010011531	ENSLCAP00010039477	ENSLCAP00010011531	ENSLCAP00010039477	Plakophilin 1b.	Si:ch73-74h11.1; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion.	0.596
ENSLCAP00010011531	LOC108883426	ENSLCAP00010011531	ENSLCAP00010022094	Plakophilin 1b.	Uncharacterized protein; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion.	0.596
ENSLCAP00010011531	LOC108900676	ENSLCAP00010011531	ENSLCAP00010039401	Plakophilin 1b.	Uncharacterized protein; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion.	0.596
ENSLCAP00010011531	ctnnb1	ENSLCAP00010011531	ENSLCAP00010036719	Plakophilin 1b.	Uncharacterized protein.	0.470
ENSLCAP00010016110	casp7	ENSLCAP00010016110	ENSLCAP00010008781	Capping protein (actin filament), gelsolin-like b.	Uncharacterized protein; Belongs to the peptidase C14A family.	0.411
ENSLCAP00010017458	ENSLCAP00010026372	ENSLCAP00010017458	ENSLCAP00010026372	Tight junction protein 1a; Belongs to the MAGUK family.	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	0.401
ENSLCAP00010017458	ENSLCAP00010058779	ENSLCAP00010017458	ENSLCAP00010058779	Tight junction protein 1a; Belongs to the MAGUK family.	Cadherin 31; Cadherins are calcium-dependent cell adhesion proteins.	0.401
ENSLCAP00010017458	LOC108876659	ENSLCAP00010017458	ENSLCAP00010018049	Tight junction protein 1a; Belongs to the MAGUK family.	Uncharacterized protein; Belongs to the MAGUK family.	0.901
ENSLCAP00010017458	LOC108879018	ENSLCAP00010017458	ENSLCAP00010021346	Tight junction protein 1a; Belongs to the MAGUK family.	Uncharacterized protein; Belongs to the MAGUK family.	0.559
ENSLCAP00010017458	LOC108889024	ENSLCAP00010017458	ENSLCAP00010050623	Tight junction protein 1a; Belongs to the MAGUK family.	Uncharacterized protein; Belongs to the MAGUK family.	0.641