STRINGSTRING
ldlrad4 ldlrad4 LOC108887878 LOC108887878 rps27a rps27a strap strap smad7 smad7 LOC108876160 LOC108876160 STUB1 STUB1 smad3 smad3 TGFBR2 TGFBR2 LOC108876789 LOC108876789 LOC108878489 LOC108878489 ENSLCAP00010038554 ENSLCAP00010038554 Ubb Ubb LOC108881978 LOC108881978 LOC108884387 LOC108884387 LOC108876301 LOC108876301 LOC108883656 LOC108883656 ENSLCAP00010046672 ENSLCAP00010046672 LOC108876789-2 LOC108876789-2 LOC108878032 LOC108878032 LOC108886789 LOC108886789 bambi bambi LOC108886018 LOC108886018
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ldlrad4Uncharacterized protein. (323 aa)
LOC108887878Mothers against decapentaplegic homolog. (452 aa)
rps27aUbiquitin-like domain-containing protein. (156 aa)
strapWD_REPEATS_REGION domain-containing protein. (350 aa)
smad7Mothers against decapentaplegic homolog. (376 aa)
LOC108876160Transforming growth factor beta; Belongs to the TGF-beta family. (386 aa)
STUB1Uncharacterized protein. (290 aa)
smad3Mothers against decapentaplegic homolog. (449 aa)
TGFBR2Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (542 aa)
LOC108876789Ubiquitin-like domain-containing protein. (128 aa)
LOC108878489Mothers against decapentaplegic homolog. (467 aa)
ENSLCAP00010038554Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (515 aa)
UbbUbiquitin B. (517 aa)
LOC108881978Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (647 aa)
LOC108884387Uncharacterized protein. (327 aa)
LOC108876301TGF-beta receptor type-2; Transmembrane serine/threonine kinase forming with the TGF- beta type I serine/threonine kinase receptor, TGFBR1, the non- promiscuous receptor for the TGF-beta cytokines TGFB1, TGFB2 and TGFB3. Transduces the TGFB1, TGFB2 and TGFB3 signal from the cell surface to the cytoplasm and is thus regulating a plethora of physiological and pathological processes including cell cycle arrest in epithelial and hematopoietic cells, control of mesenchymal cell proliferation and differentiation, wound healing, extracellular matrix production, immunosuppression and carcinoge [...] (591 aa)
LOC108883656Ubiquitin-like domain-containing protein. (128 aa)
ENSLCAP00010046672Ubiquitin-like domain-containing protein. (116 aa)
LOC108876789-2Ubiquitin-like domain-containing protein. (155 aa)
LOC108878032STIP1 homology and U box-containing protein 1-like. (290 aa)
LOC108886789Uncharacterized protein. (284 aa)
bambiBMP and activin membrane-bound inhibitor homolog; Negatively regulates TGF-beta signaling. Belongs to the BAMBI family. (259 aa)
LOC108886018Mothers against decapentaplegic homolog. (474 aa)
Your Current Organism:
Lates calcarifer
NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.