STRINGSTRING
LOC108887200 LOC108887200 ENSLCAP00010000450 ENSLCAP00010000450 Pot1 Pot1 ENSLCAP00010002355 ENSLCAP00010002355 kat5 kat5 Hmga2 Hmga2 ENSLCAP00010009077 ENSLCAP00010009077 ENSLCAP00010009091 ENSLCAP00010009091 ENSLCAP00010010263 ENSLCAP00010010263 LOC108899257 LOC108899257 cdk2 cdk2 LOC108883053 LOC108883053 ENSLCAP00010015772 ENSLCAP00010015772 LOC108879980 LOC108879980 cdkn1b cdkn1b ENSLCAP00010018196 ENSLCAP00010018196 LOC108901366 LOC108901366 ENSLCAP00010018208 ENSLCAP00010018208 ENSLCAP00010018730 ENSLCAP00010018730 ENSLCAP00010018773 ENSLCAP00010018773 ENSLCAP00010018791 ENSLCAP00010018791 LOC108901361 LOC108901361 LOC108884668 LOC108884668 ccne1 ccne1 LOC108890174 LOC108890174 ENSLCAP00010023066 ENSLCAP00010023066 LOC108893335 LOC108893335 ENSLCAP00010025788 ENSLCAP00010025788 ENSLCAP00010026293 ENSLCAP00010026293 LOC108873640 LOC108873640 LOC108901759 LOC108901759 ENSLCAP00010026411 ENSLCAP00010026411 ENSLCAP00010026416 ENSLCAP00010026416 ENSLCAP00010026444 ENSLCAP00010026444 LOC108901759-2 LOC108901759-2 ENSLCAP00010026604 ENSLCAP00010026604 LOC108873640-2 LOC108873640-2 CCNE2 CCNE2 ENSLCAP00010029451 ENSLCAP00010029451 ENSLCAP00010029462 ENSLCAP00010029462 ENSLCAP00010029487 ENSLCAP00010029487 ENSLCAP00010029519 ENSLCAP00010029519 ENSLCAP00010029533 ENSLCAP00010029533 ENSLCAP00010029538 ENSLCAP00010029538 ENSLCAP00010029546 ENSLCAP00010029546 ENSLCAP00010029552 ENSLCAP00010029552 ENSLCAP00010029557 ENSLCAP00010029557 ENSLCAP00010031126 ENSLCAP00010031126 Mre11 Mre11 ENSLCAP00010038762 ENSLCAP00010038762 ENSLCAP00010039837 ENSLCAP00010039837 LOC108900816 LOC108900816 LOC108873639 LOC108873639 ENSLCAP00010041630 ENSLCAP00010041630 ENSLCAP00010042963 ENSLCAP00010042963 ENSLCAP00010042987 ENSLCAP00010042987 ENSLCAP00010042999 ENSLCAP00010042999 rad50 rad50 cdk2-2 cdk2-2 ENSLCAP00010044578 ENSLCAP00010044578 ENSLCAP00010046094 ENSLCAP00010046094 H2AZ1 H2AZ1 ccna1 ccna1 ENSLCAP00010050470 ENSLCAP00010050470 LOC108877208 LOC108877208 ENSLCAP00010050501 ENSLCAP00010050501 LOC108873640-3 LOC108873640-3 ENSLCAP00010051148 ENSLCAP00010051148 LOC108878404 LOC108878404 ENSLCAP00010051496 ENSLCAP00010051496 LOC108890605 LOC108890605 LOC108892335 LOC108892335 ENSLCAP00010054492 ENSLCAP00010054492 Terf2 Terf2 ENSLCAP00010055044 ENSLCAP00010055044 ENSLCAP00010055640 ENSLCAP00010055640 ENSLCAP00010055815 ENSLCAP00010055815 LOC108902710 LOC108902710 ENSLCAP00010021619 ENSLCAP00010021619 ccna2 ccna2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC108887200Uncharacterized protein. (824 aa)
ENSLCAP00010000450TINF2_N domain-containing protein. (96 aa)
Pot1Protection of telomeres 1 homolog. (536 aa)
ENSLCAP00010002355Histone H2A; Belongs to the histone H2A family. (134 aa)
kat5Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (578 aa)
Hmga2High mobility group AT-hook 2. (91 aa)
ENSLCAP00010009077Histone H2A; Belongs to the histone H2A family. (108 aa)
ENSLCAP00010009091Histone H2B; Belongs to the histone H2B family. (67 aa)
ENSLCAP00010010263Histone H2B; Belongs to the histone H2B family. (117 aa)
LOC108899257Uncharacterized protein. (131 aa)
cdk2Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (298 aa)
LOC108883053Uncharacterized protein. (215 aa)
ENSLCAP00010015772Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family. (1015 aa)
LOC108879980Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. (380 aa)
cdkn1bUncharacterized protein. (185 aa)
ENSLCAP00010018196Histone H2A; Belongs to the histone H2A family. (138 aa)
LOC108901366Histone H2B; Belongs to the histone H2B family. (124 aa)
ENSLCAP00010018208Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (80 aa)
ENSLCAP00010018730Uncharacterized protein; Belongs to the histone H2A family. (242 aa)
ENSLCAP00010018773Uncharacterized protein; Belongs to the histone H2A family. (244 aa)
ENSLCAP00010018791Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (97 aa)
LOC108901361Histone H2A. (128 aa)
LOC108884668Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (395 aa)
ccne1Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (433 aa)
LOC108890174Histone H2B; Belongs to the histone H2B family. (143 aa)
ENSLCAP00010023066Uncharacterized protein. (92 aa)
LOC108893335Histone H2A; Belongs to the histone H2A family. (128 aa)
ENSLCAP00010025788Anti-silencing function 1Bb histone chaperone. (286 aa)
ENSLCAP00010026293Histone H2A; Belongs to the histone H2A family. (140 aa)
LOC108873640Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
LOC108901759Histone H2B; Belongs to the histone H2B family. (124 aa)
ENSLCAP00010026411Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (92 aa)
ENSLCAP00010026416annotation not available (67 aa)
ENSLCAP00010026444Histone H2A; Belongs to the histone H2A family. (136 aa)
LOC108901759-2Histone H2B 1/2-like. (124 aa)
ENSLCAP00010026604annotation not available (140 aa)
LOC108873640-2Histone H4. (103 aa)
CCNE2Cyclin E2; Belongs to the cyclin family. (394 aa)
ENSLCAP00010029451Histone H2A; Belongs to the histone H2A family. (132 aa)
ENSLCAP00010029462Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (92 aa)
ENSLCAP00010029487Histone H2B; Belongs to the histone H2B family. (113 aa)
ENSLCAP00010029519Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (91 aa)
ENSLCAP00010029533annotation not available (67 aa)
ENSLCAP00010029538CENP-T_C domain-containing protein. (82 aa)
ENSLCAP00010029546Histone domain-containing protein; Belongs to the histone H2B family. (54 aa)
ENSLCAP00010029552Uncharacterized protein; Belongs to the histone H2B family. (122 aa)
ENSLCAP00010029557Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (118 aa)
ENSLCAP00010031126Uncharacterized protein. (738 aa)
Mre11Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (666 aa)
ENSLCAP00010038762Uncharacterized protein. (119 aa)
ENSLCAP00010039837Uncharacterized protein. (160 aa)
LOC108900816Histone H2A; Belongs to the histone H2A family. (138 aa)
LOC108873639Histone H2B; Belongs to the histone H2B family. (122 aa)
ENSLCAP00010041630Histone H2A; Belongs to the histone H2A family. (131 aa)
ENSLCAP00010042963Histone H2B; Belongs to the histone H2B family. (175 aa)
ENSLCAP00010042987Histone H2B; Belongs to the histone H2B family. (111 aa)
ENSLCAP00010042999Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (145 aa)
rad50Zinc-hook domain-containing protein. (1313 aa)
cdk2-2Cyclin-dependent kinase 2. (298 aa)
ENSLCAP00010044578Uncharacterized protein. (476 aa)
ENSLCAP00010046094Calcineurin binding protein 1. (2153 aa)
H2AZ1Histone H2A; Belongs to the histone H2A family. (193 aa)
ccna1Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (416 aa)
ENSLCAP00010050470Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (209 aa)
LOC108877208Histone H2A; Belongs to the histone H2A family. (127 aa)
ENSLCAP00010050501annotation not available (67 aa)
LOC108873640-3Histone H4. (103 aa)
ENSLCAP00010051148E1A binding protein p400. (2942 aa)
LOC108878404Histone H2A; Belongs to the histone H2A family. (137 aa)
ENSLCAP00010051496Uncharacterized protein. (148 aa)
LOC108890605Uncharacterized protein. (185 aa)
LOC108892335Histone H2A; Belongs to the histone H2A family. (127 aa)
ENSLCAP00010054492Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (91 aa)
Terf2Uncharacterized protein. (185 aa)
ENSLCAP00010055044HTH myb-type domain-containing protein. (124 aa)
ENSLCAP00010055640annotation not available (277 aa)
ENSLCAP00010055815Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (285 aa)
LOC108902710Uncharacterized protein. (197 aa)
ENSLCAP00010021619Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (93 aa)
ccna2Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (436 aa)
Your Current Organism:
Lates calcarifer
NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch
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