85 items (Lates calcarifer) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	tcp1	Uncharacterized protein. (558 aa)
	LOC108876767	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. (81 aa)
	ENSLCAP00010041409	Uncharacterized protein. (470 aa)
	gng3	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. (75 aa)
	ENSLCAP00010044313	Peptidylprolyl isomerase. (555 aa)
	SPHK1-2	DAGKc domain-containing protein. (557 aa)
	cct5	Uncharacterized protein. (541 aa)
	cct8	Uncharacterized protein. (558 aa)
	LOC108890735-2	Prefoldin subunit 3-like. (195 aa)
	ENSLCAP00010025831	DAGKc domain-containing protein. (343 aa)
	pfdn2	Uncharacterized protein. (175 aa)
	LOC108873100	Uncharacterized protein. (361 aa)
	ENSLCAP00010029659	ZP domain-containing protein. (413 aa)
	LOC108880306	ZP domain-containing protein. (371 aa)
	arfgef1	SEC7 domain-containing protein. (1953 aa)
	cct3	T-complex protein 1 subunit gamma. (543 aa)
	ENSLCAP00010030197	Regulator of G protein signaling 9b. (488 aa)
	LOC108878372	Uncharacterized protein. (354 aa)
	ENSLCAP00010060883	Uncharacterized protein. (382 aa)
	LOC108891102	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. (418 aa)
	LOC108880480	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. (68 aa)
	gnb1	WD_REPEATS_REGION domain-containing protein. (340 aa)
	FKBP10	Peptidylprolyl isomerase. (540 aa)
	LOC108884871	SEC7 domain-containing protein. (1850 aa)
	LOC108893375	WD_REPEATS_REGION domain-containing protein. (350 aa)
	snx19	Uncharacterized protein. (981 aa)
	LOC108878959	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. (72 aa)
	LOC108896753	Phosducin domain-containing protein. (236 aa)
	LOC108893936	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. (70 aa)
	LOC108874970	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. (68 aa)
	LOC108874918	Uncharacterized protein. (402 aa)
	ENSLCAP00010059483	FAM161A, centrosomal protein. (465 aa)
	LOC108881277	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5. (68 aa)
	cct6a	Uncharacterized protein. (531 aa)
	ENSLCAP00010048362	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. (104 aa)
	gnb4	WD_REPEATS_REGION domain-containing protein. (343 aa)
	LOC108876959	WD_REPEATS_REGION domain-containing protein. (395 aa)
	LOC108887531	WD_REPEATS_REGION domain-containing protein. (342 aa)
	pfdn6	Uncharacterized protein. (142 aa)
	gng2	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. (71 aa)
	ENSLCAP00010059482	Uncharacterized protein. (127 aa)
	pfdn4	Prefoldin subunit 4; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins; Belongs to the prefoldin subunit beta family. (150 aa)
	LOC108888462	G protein gamma domain-containing protein. (67 aa)
	LOC108881409	Uncharacterized protein. (369 aa)
	Cct4	T-complex protein 1 subunit delta. (537 aa)
	LOC108881412	Uncharacterized protein. (402 aa)
	Gngt2	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. (73 aa)
	LOC108890849	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (392 aa)
	cct2	Uncharacterized protein. (535 aa)
	ENSLCAP00010018397	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (235 aa)
	LOC108886571	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (407 aa)
	ENSLCAP00010019681	Regulator of G protein signaling 9a. (454 aa)
	LOC108902169	ZP domain-containing protein. (389 aa)
	GNG13	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. (100 aa)
	pfdn1	Uncharacterized protein. (122 aa)
	LOC108890309	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (232 aa)
	LOC108899241	WD_REPEATS_REGION domain-containing protein. (340 aa)
	LOC108875732	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. (71 aa)
	ENSLCAP00010036704	Peptidylprolyl isomerase. (599 aa)
	rgs7	Uncharacterized protein. (473 aa)
	LOC108883509	ZP domain-containing protein. (462 aa)
	LOC108898475	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. (72 aa)
	GNG5	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. (68 aa)
	LOC108884491	Phosducin domain-containing protein. (235 aa)
	pfdn5	Uncharacterized protein. (160 aa)
	csnk2a2	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (351 aa)
	GNG4	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. (75 aa)
	gnb3	WD_REPEATS_REGION domain-containing protein. (340 aa)
	gnb5	WD_REPEATS_REGION domain-containing protein. (408 aa)
	LOC108897801	Peptidylprolyl isomerase. (578 aa)
	LOC108890735	Prefoldin subunit 3; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins; Belongs to the prefoldin subunit alpha family. (195 aa)
	LOC108875732-2	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-10-like. (71 aa)
	LOC108894169	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (380 aa)
	ENSLCAP00010013630	Peptidylprolyl isomerase. (584 aa)
	Gng10	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. (113 aa)
	ENSLCAP00010005935	Guanine nucleotide binding protein (G protein), q polypeptide. (374 aa)
	LOC108874116	Uncharacterized protein. (354 aa)
	LOC108893049	Uncharacterized protein. (553 aa)
	LOC108883850	Uncharacterized protein. (495 aa)
	pdcl	Phosducin domain-containing protein. (306 aa)
	SPHK1	Sphingosine kinase 1. (360 aa)
	ENSLCAP00010002252	Sorting nexin 19a. (896 aa)
	LOC108883323	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. (68 aa)
	LOC108878688	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. (418 aa)
	cct7	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin. (546 aa)

Your Current Organism:

Lates calcarifer

NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Cct4	ENSLCAP00010019681	ENSLCAP00010059463	ENSLCAP00010019681	T-complex protein 1 subunit delta.	Regulator of G protein signaling 9a.	0.521
Cct4	ENSLCAP00010025831	ENSLCAP00010059463	ENSLCAP00010025831	T-complex protein 1 subunit delta.	DAGKc domain-containing protein.	0.569
Cct4	ENSLCAP00010030197	ENSLCAP00010059463	ENSLCAP00010030197	T-complex protein 1 subunit delta.	Regulator of G protein signaling 9b.	0.521
Cct4	ENSLCAP00010041409	ENSLCAP00010059463	ENSLCAP00010041409	T-complex protein 1 subunit delta.	Uncharacterized protein.	0.521
Cct4	GNG5	ENSLCAP00010059463	ENSLCAP00010032592	T-complex protein 1 subunit delta.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.512
Cct4	LOC108875732	ENSLCAP00010059463	ENSLCAP00010011615	T-complex protein 1 subunit delta.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.425
Cct4	LOC108875732-2	ENSLCAP00010059463	ENSLCAP00010035892	T-complex protein 1 subunit delta.	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-10-like.	0.425
Cct4	LOC108876959	ENSLCAP00010059463	ENSLCAP00010049893	T-complex protein 1 subunit delta.	WD_REPEATS_REGION domain-containing protein.	0.603
Cct4	LOC108881277	ENSLCAP00010059463	ENSLCAP00010044998	T-complex protein 1 subunit delta.	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5.	0.512
Cct4	LOC108883323	ENSLCAP00010059463	ENSLCAP00010001992	T-complex protein 1 subunit delta.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.512
Cct4	LOC108883850	ENSLCAP00010059463	ENSLCAP00010004768	T-complex protein 1 subunit delta.	Uncharacterized protein.	0.521
Cct4	LOC108884491	ENSLCAP00010059463	ENSLCAP00010032633	T-complex protein 1 subunit delta.	Phosducin domain-containing protein.	0.612
Cct4	LOC108887531	ENSLCAP00010059463	ENSLCAP00010052106	T-complex protein 1 subunit delta.	WD_REPEATS_REGION domain-containing protein.	0.458
Cct4	LOC108890735	ENSLCAP00010059463	ENSLCAP00010009643	T-complex protein 1 subunit delta.	Prefoldin subunit 3; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins; Belongs to the prefoldin subunit alpha family.	0.762
Cct4	LOC108890735-2	ENSLCAP00010059463	ENSLCAP00010025563	T-complex protein 1 subunit delta.	Prefoldin subunit 3-like.	0.762
Cct4	LOC108893049	ENSLCAP00010059463	ENSLCAP00010005525	T-complex protein 1 subunit delta.	Uncharacterized protein.	0.521
Cct4	LOC108893375	ENSLCAP00010059463	ENSLCAP00010001751	T-complex protein 1 subunit delta.	WD_REPEATS_REGION domain-containing protein.	0.556
Cct4	LOC108896753	ENSLCAP00010059463	ENSLCAP00010017723	T-complex protein 1 subunit delta.	Phosducin domain-containing protein.	0.612
Cct4	LOC108898475	ENSLCAP00010059463	ENSLCAP00010032102	T-complex protein 1 subunit delta.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.425
Cct4	LOC108899241	ENSLCAP00010059463	ENSLCAP00010012114	T-complex protein 1 subunit delta.	WD_REPEATS_REGION domain-containing protein.	0.556