19 items (Lates calcarifer) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSLCAP00010038762	Uncharacterized protein. (119 aa)
	E2f8	E2F transcription factor 8. (591 aa)
	ENSLCAP00010033001	AT rich interactive domain 3C (BRIGHT-like). (563 aa)
	E2f7	E2F transcription factor 7. (571 aa)
	CCNE2	Cyclin E2; Belongs to the cyclin family. (394 aa)
	LOC108890605	Uncharacterized protein. (185 aa)
	ENSLCAP00010055640	annotation not available (277 aa)
	ENSLCAP00010055815	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (285 aa)
	ccna2	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (436 aa)
	LOC108897744	Uncharacterized protein. (605 aa)
	arid3a	Uncharacterized protein. (553 aa)
	ccne1	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (433 aa)
	LOC108884668	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (395 aa)
	LOC108876748	Uncharacterized protein. (572 aa)
	cdkn1b	Uncharacterized protein. (185 aa)
	LOC108883053	Uncharacterized protein. (215 aa)
	cdk2	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (298 aa)
	ccna1	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (416 aa)
	cdk2-2	Cyclin-dependent kinase 2. (298 aa)

Your Current Organism:

Lates calcarifer

NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CCNE2	ENSLCAP00010038762	ENSLCAP00010029171	ENSLCAP00010038762	Cyclin E2; Belongs to the cyclin family.	Uncharacterized protein.	0.795
CCNE2	ENSLCAP00010055640	ENSLCAP00010029171	ENSLCAP00010055640	Cyclin E2; Belongs to the cyclin family.	annotation not available	0.733
CCNE2	ENSLCAP00010055815	ENSLCAP00010029171	ENSLCAP00010055815	Cyclin E2; Belongs to the cyclin family.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.733
CCNE2	LOC108883053	ENSLCAP00010029171	ENSLCAP00010014436	Cyclin E2; Belongs to the cyclin family.	Uncharacterized protein.	0.795
CCNE2	LOC108890605	ENSLCAP00010029171	ENSLCAP00010051556	Cyclin E2; Belongs to the cyclin family.	Uncharacterized protein.	0.795
CCNE2	ccna1	ENSLCAP00010029171	ENSLCAP00010047573	Cyclin E2; Belongs to the cyclin family.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.776
CCNE2	ccna2	ENSLCAP00010029171	ENSLCAP00010056469	Cyclin E2; Belongs to the cyclin family.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.768
CCNE2	cdk2	ENSLCAP00010029171	ENSLCAP00010014041	Cyclin E2; Belongs to the cyclin family.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.771
CCNE2	cdk2-2	ENSLCAP00010029171	ENSLCAP00010044385	Cyclin E2; Belongs to the cyclin family.	Cyclin-dependent kinase 2.	0.771
CCNE2	cdkn1b	ENSLCAP00010029171	ENSLCAP00010016684	Cyclin E2; Belongs to the cyclin family.	Uncharacterized protein.	0.795
E2f7	E2f8	ENSLCAP00010032922	ENSLCAP00010037936	E2F transcription factor 7.	E2F transcription factor 8.	0.648
E2f7	ccna1	ENSLCAP00010032922	ENSLCAP00010047573	E2F transcription factor 7.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.436
E2f7	ccna2	ENSLCAP00010032922	ENSLCAP00010056469	E2F transcription factor 7.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.436
E2f8	E2f7	ENSLCAP00010037936	ENSLCAP00010032922	E2F transcription factor 8.	E2F transcription factor 7.	0.648
E2f8	ccna1	ENSLCAP00010037936	ENSLCAP00010047573	E2F transcription factor 8.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.436
E2f8	ccna2	ENSLCAP00010037936	ENSLCAP00010056469	E2F transcription factor 8.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.436
ENSLCAP00010038762	CCNE2	ENSLCAP00010038762	ENSLCAP00010029171	Uncharacterized protein.	Cyclin E2; Belongs to the cyclin family.	0.795
ENSLCAP00010038762	ENSLCAP00010055640	ENSLCAP00010038762	ENSLCAP00010055640	Uncharacterized protein.	annotation not available	0.672
ENSLCAP00010038762	ENSLCAP00010055815	ENSLCAP00010038762	ENSLCAP00010055815	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.672
ENSLCAP00010038762	LOC108884668	ENSLCAP00010038762	ENSLCAP00010019748	Uncharacterized protein.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.795