11 items (Lates calcarifer) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	cdk2-2	Cyclin-dependent kinase 2. (298 aa)
	cdk4	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (306 aa)
	LOC108879779-2	G1/S-specific cyclin-D1-like. (293 aa)
	LOC108879779	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (293 aa)
	ENSLCAP00010055640	annotation not available (277 aa)
	ENSLCAP00010055815	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (285 aa)
	LOC108887432	Tyrosine-protein kinase. (517 aa)
	ccnd1	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (292 aa)
	cdk2	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (298 aa)
	cdkn1b	Uncharacterized protein. (185 aa)
	ccne1	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (433 aa)

Your Current Organism:

Lates calcarifer

NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSLCAP00010055640	LOC108879779	ENSLCAP00010055640	ENSLCAP00010049677	annotation not available	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.676
ENSLCAP00010055640	LOC108879779-2	ENSLCAP00010055640	ENSLCAP00010053877	annotation not available	G1/S-specific cyclin-D1-like.	0.676
ENSLCAP00010055640	ccnd1	ENSLCAP00010055640	ENSLCAP00010000381	annotation not available	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.676
ENSLCAP00010055640	ccne1	ENSLCAP00010055640	ENSLCAP00010020590	annotation not available	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.798
ENSLCAP00010055640	cdkn1b	ENSLCAP00010055640	ENSLCAP00010016684	annotation not available	Uncharacterized protein.	0.583
ENSLCAP00010055815	LOC108879779	ENSLCAP00010055815	ENSLCAP00010049677	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.676
ENSLCAP00010055815	LOC108879779-2	ENSLCAP00010055815	ENSLCAP00010053877	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	G1/S-specific cyclin-D1-like.	0.676
ENSLCAP00010055815	ccnd1	ENSLCAP00010055815	ENSLCAP00010000381	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.676
ENSLCAP00010055815	ccne1	ENSLCAP00010055815	ENSLCAP00010020590	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.798
ENSLCAP00010055815	cdkn1b	ENSLCAP00010055815	ENSLCAP00010016684	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.583
LOC108879779	ENSLCAP00010055640	ENSLCAP00010049677	ENSLCAP00010055640	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	annotation not available	0.676
LOC108879779	ENSLCAP00010055815	ENSLCAP00010049677	ENSLCAP00010055815	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.676
LOC108879779	ccnd1	ENSLCAP00010049677	ENSLCAP00010000381	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.901
LOC108879779	ccne1	ENSLCAP00010049677	ENSLCAP00010020590	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.446
LOC108879779	cdk2	ENSLCAP00010049677	ENSLCAP00010014041	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.676
LOC108879779	cdk2-2	ENSLCAP00010049677	ENSLCAP00010044385	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	Cyclin-dependent kinase 2.	0.676
LOC108879779	cdk4	ENSLCAP00010049677	ENSLCAP00010044799	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.980
LOC108879779	cdkn1b	ENSLCAP00010049677	ENSLCAP00010016684	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	Uncharacterized protein.	0.873
LOC108879779-2	ENSLCAP00010055640	ENSLCAP00010053877	ENSLCAP00010055640	G1/S-specific cyclin-D1-like.	annotation not available	0.676
LOC108879779-2	ENSLCAP00010055815	ENSLCAP00010053877	ENSLCAP00010055815	G1/S-specific cyclin-D1-like.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.676