STRINGSTRING
rnf181 rnf181 ube2v2 ube2v2 ENSLCAP00010010355 ENSLCAP00010010355 ENSLCAP00010010263 ENSLCAP00010010263 wdr61 wdr61 LOC108890157 LOC108890157 LOC108873753 LOC108873753 pex12 pex12 pex10 pex10 Selenos Selenos LOC108901366 LOC108901366 ENSLCAP00010018730 ENSLCAP00010018730 ENSLCAP00010018773 ENSLCAP00010018773 LOC108890174 LOC108890174 tmem129 tmem129 ENSLCAP00010023490 ENSLCAP00010023490 LOC108876623 LOC108876623 LOC108901759 LOC108901759 ENSLCAP00010026416 ENSLCAP00010026416 LOC108901759-2 LOC108901759-2 ENSLCAP00010029487 ENSLCAP00010029487 ENSLCAP00010029533 ENSLCAP00010029533 ENSLCAP00010029546 ENSLCAP00010029546 ENSLCAP00010029552 ENSLCAP00010029552 ENSLCAP00010030587 ENSLCAP00010030587 LOC108883656 LOC108883656 pex5l pex5l rnf144a rnf144a ENSLCAP00010046672 ENSLCAP00010046672 LOC108876789-2 LOC108876789-2 ENSLCAP00010059660 ENSLCAP00010059660 LOC108880465 LOC108880465 ENSLCAP00010050501 ENSLCAP00010050501 RRAGA RRAGA Cdc73 Cdc73 cinp cinp rtf1 rtf1 LOC108873639 LOC108873639 slc39a13 slc39a13 UBE2A UBE2A pex13 pex13 ENSLCAP00010003901 ENSLCAP00010003901 ube2d2 ube2d2 pex2 pex2 ENSLCAP00010056656 ENSLCAP00010056656 rad18 rad18 Paf1 Paf1 LOC108889222 LOC108889222 LOC108883857 LOC108883857 rps27a rps27a LOC108899209 LOC108899209 pcna pcna ENSLCAP00010009091 ENSLCAP00010009091 pex14 pex14 LOC108876789 LOC108876789 kxd1 kxd1 ctr9 ctr9 yipf4 yipf4 ENSLCAP00010034591 ENSLCAP00010034591 LOC108890486 LOC108890486 ENSLCAP00010040528 ENSLCAP00010040528 Ubb Ubb ENSLCAP00010009937 ENSLCAP00010009937 pex5 pex5 Shprh Shprh yipf5 yipf5 Zc2hc1c Zc2hc1c ENSLCAP00010042963 ENSLCAP00010042963 ENSLCAP00010042987 ENSLCAP00010042987
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rnf181RING-type domain-containing protein. (157 aa)
ube2v2UBIQUITIN_CONJUGAT_2 domain-containing protein. (175 aa)
ENSLCAP00010010355Peroxisomal biogenesis factor 5-like b. (348 aa)
ENSLCAP00010010263Histone H2B; Belongs to the histone H2B family. (117 aa)
wdr61WD_REPEATS_REGION domain-containing protein. (305 aa)
LOC108890157UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (183 aa)
LOC108873753UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (175 aa)
pex12Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family. (365 aa)
pex10RING-type domain-containing protein. (329 aa)
SelenosSelenoprotein S. (145 aa)
LOC108901366Histone H2B; Belongs to the histone H2B family. (124 aa)
ENSLCAP00010018730Uncharacterized protein; Belongs to the histone H2A family. (242 aa)
ENSLCAP00010018773Uncharacterized protein; Belongs to the histone H2A family. (244 aa)
LOC108890174Histone H2B; Belongs to the histone H2B family. (143 aa)
tmem129Uncharacterized protein. (366 aa)
ENSLCAP00010023490Ubiquitin-conjugating enzyme E2A (RAD6 homolog). (147 aa)
LOC108876623UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (187 aa)
LOC108901759Histone H2B; Belongs to the histone H2B family. (124 aa)
ENSLCAP00010026416annotation not available (67 aa)
LOC108901759-2Histone H2B 1/2-like. (124 aa)
ENSLCAP00010029487Histone H2B; Belongs to the histone H2B family. (113 aa)
ENSLCAP00010029533annotation not available (67 aa)
ENSLCAP00010029546Histone domain-containing protein; Belongs to the histone H2B family. (54 aa)
ENSLCAP00010029552Uncharacterized protein; Belongs to the histone H2B family. (122 aa)
ENSLCAP00010030587Helicase-like transcription factor. (813 aa)
LOC108883656Ubiquitin-like domain-containing protein. (128 aa)
pex5lTPR_REGION domain-containing protein. (622 aa)
rnf144aRBR-type E3 ubiquitin transferase. (312 aa)
ENSLCAP00010046672Ubiquitin-like domain-containing protein. (116 aa)
LOC108876789-2Ubiquitin-like domain-containing protein. (155 aa)
ENSLCAP00010059660WW domain containing adaptor with coiled-coil a. (593 aa)
LOC108880465UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (157 aa)
ENSLCAP00010050501annotation not available (67 aa)
RRAGARas related GTP binding A. (316 aa)
Cdc73Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae). (542 aa)
cinpUncharacterized protein. (219 aa)
rtf1Plus3 domain-containing protein. (677 aa)
LOC108873639Histone H2B; Belongs to the histone H2B family. (122 aa)
slc39a13Uncharacterized protein. (382 aa)
UBE2AUbiquitin-conjugating enzyme E2A (RAD6 homolog); Belongs to the ubiquitin-conjugating enzyme family. (147 aa)
pex13SH3 domain-containing protein. (426 aa)
ENSLCAP00010003901UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (160 aa)
ube2d2UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (147 aa)
pex2RING-type domain-containing protein. (328 aa)
ENSLCAP00010056656E3 ubiquitin protein ligase. (982 aa)
rad18Uncharacterized protein. (505 aa)
Paf1PAF1 homolog, Paf1/RNA polymerase II complex component. (512 aa)
LOC108889222UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (201 aa)
LOC108883857WW domain-containing protein. (526 aa)
rps27aUbiquitin-like domain-containing protein. (156 aa)
LOC108899209E3 ubiquitin protein ligase. (1048 aa)
pcnaProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (260 aa)
ENSLCAP00010009091Histone H2B; Belongs to the histone H2B family. (67 aa)
pex14Pex14_N domain-containing protein. (391 aa)
LOC108876789Ubiquitin-like domain-containing protein. (128 aa)
kxd1KxDL domain-containing protein. (184 aa)
ctr9TPR_REGION domain-containing protein. (1164 aa)
yipf4Protein YIPF. (246 aa)
ENSLCAP00010034591UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (167 aa)
LOC108890486UBIQUITIN_CONJUGAT_2 domain-containing protein. (202 aa)
ENSLCAP00010040528UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (161 aa)
UbbUbiquitin B. (517 aa)
ENSLCAP00010009937LEO1 homolog, Paf1/RNA polymerase II complex component. (635 aa)
pex5TPR_REGION domain-containing protein. (642 aa)
ShprhSNF2 histone linker PHD RING helicase. (1632 aa)
yipf5Protein YIPF. (257 aa)
Zc2hc1cUncharacterized protein. (444 aa)
ENSLCAP00010042963Histone H2B; Belongs to the histone H2B family. (175 aa)
ENSLCAP00010042987Histone H2B; Belongs to the histone H2B family. (111 aa)
Your Current Organism:
Lates calcarifer
NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch
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