82 items (Lates calcarifer) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSLCAP00010046672	Ubiquitin-like domain-containing protein. (116 aa)
	LOC108876789-2	Ubiquitin-like domain-containing protein. (155 aa)
	ENSLCAP00010047128	Epidermal growth factor. (1034 aa)
	LOC108900649	Uncharacterized protein. (505 aa)
	erbb4	Receptor protein-tyrosine kinase. (1405 aa)
	ENSLCAP00010048838	Uncharacterized protein. (578 aa)
	LOC108876575	Protein kinase domain-containing protein. (1467 aa)
	ENSLCAP00010049426	ELMO domain-containing protein. (637 aa)
	LOC108879779	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (293 aa)
	LOC108893569	Uncharacterized protein. (1529 aa)
	LOC108878723	Uncharacterized protein. (712 aa)
	LOC108882842	EGF-like domain-containing protein. (240 aa)
	LOC108893435	Uncharacterized protein. (778 aa)
	cdkn1b	Uncharacterized protein. (185 aa)
	ENSLCAP00010016597	Engulfment and cell motility 1 (ced-12 homolog, C. elegans). (734 aa)
	cbl	Uncharacterized protein. (958 aa)
	ENSLCAP00010015912	ELMO domain-containing protein. (121 aa)
	LOC108894667	Receptor protein-tyrosine kinase. (1198 aa)
	pxn	Uncharacterized protein. (814 aa)
	cdk2	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (298 aa)
	TGFB1I1	Uncharacterized protein; Belongs to the paxillin family. (493 aa)
	erbb2	Receptor protein-tyrosine kinase. (1300 aa)
	CSDE1	Uncharacterized protein. (913 aa)
	ENSLCAP00010011377	EGF-like domain-containing protein. (85 aa)
	KHDRBS3	KH RNA binding domain containing, signal transduction associated 3. (321 aa)
	ENSLCAP00010009561	EGF-like domain-containing protein. (86 aa)
	LOC108874127	EGF-like domain-containing protein. (186 aa)
	egfr	Receptor protein-tyrosine kinase. (1196 aa)
	rps27a	Ubiquitin-like domain-containing protein. (156 aa)
	elmod2	ELMO domain-containing protein. (298 aa)
	ENSLCAP00010002044	KH domain containing, RNA binding, signal transduction associated 1b. (330 aa)
	LOC108872934	EGF-like domain-containing protein. (720 aa)
	crk	Uncharacterized protein. (315 aa)
	ccnd1	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (292 aa)
	ENSLCAP00010000123	Cbl proto-oncogene C, E3 ubiquitin protein ligase. (533 aa)
	LOC108879779-2	G1/S-specific cyclin-D1-like. (293 aa)
	nono	Uncharacterized protein. (441 aa)
	elmod3	ELMO domain-containing protein. (434 aa)
	LOC108898932	ELMO domain-containing protein. (721 aa)
	ENSLCAP00010055640	annotation not available (277 aa)
	ENSLCAP00010055815	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (285 aa)
	LOC108893685	Uncharacterized protein. (864 aa)
	RNF222	Ring finger protein 222. (201 aa)
	LOC108887432	Tyrosine-protein kinase. (517 aa)
	socs3	Uncharacterized protein. (205 aa)
	LOC108882522	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (479 aa)
	khdrbs2	KH domain-containing protein. (345 aa)
	Rasa1	RAS p21 protein activator (GTPase activating protein) 1a. (1066 aa)
	LOC108879049	Uncharacterized protein. (473 aa)
	ccne1	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (433 aa)
	LOC108892473	KH domain-containing protein. (400 aa)
	LOC108901899	ELMO domain-containing protein. (715 aa)
	elmod1	ELMO domain-containing protein. (327 aa)
	LOC108877413	Uncharacterized protein. (398 aa)
	LOC108876107	Uncharacterized protein. (228 aa)
	LOC108890365	Uncharacterized protein; Belongs to the beta/gamma-crystallin family. (209 aa)
	sfpq	Uncharacterized protein. (628 aa)
	LOC108897414	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (479 aa)
	ENSLCAP00010029616	ELMO domain-containing protein. (456 aa)
	ENSLCAP00010029673	Uncharacterized protein; Belongs to the beta/gamma-crystallin family. (190 aa)
	LOC108876789	Ubiquitin-like domain-containing protein. (128 aa)
	LOC108891917	Uncharacterized protein. (319 aa)
	kxd1	KxDL domain-containing protein. (184 aa)
	LOC108890482	Tyrosine-protein phosphatase non-receptor type. (435 aa)
	kras	Uncharacterized protein. (189 aa)
	Gpnmb	Glycoprotein (transmembrane) nmb. (471 aa)
	hras	Uncharacterized protein. (189 aa)
	Stap2	Signal transducing adaptor family member 2a. (361 aa)
	dok1	Uncharacterized protein. (689 aa)
	ENSLCAP00010038775	Uncharacterized protein. (430 aa)
	ENSLCAP00010038780	Protein kinase domain-containing protein. (495 aa)
	Arhgap35	Rho GTPase activating protein 35a. (1554 aa)
	Ubb	Ubiquitin B. (517 aa)
	ENSLCAP00010041386	Zgc:55558. (187 aa)
	ENSLCAP00010042966	Receptor protein-tyrosine kinase. (1301 aa)
	LOC108873293	Tyrosine-protein kinase. (504 aa)
	cdk2-2	Cyclin-dependent kinase 2. (298 aa)
	LOC108878379	Uncharacterized protein. (786 aa)
	cdk4	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (306 aa)
	ENSLCAP00010045215	Protein kinase domain-containing protein. (179 aa)
	ARAP1	Uncharacterized protein. (1616 aa)
	LOC108883656	Ubiquitin-like domain-containing protein. (128 aa)

Your Current Organism:

Lates calcarifer

NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARAP1	LOC108887432	ENSLCAP00010045758	ENSLCAP00010057002	Uncharacterized protein.	Tyrosine-protein kinase.	0.400
Arhgap35	ENSLCAP00010045215	ENSLCAP00010040440	ENSLCAP00010045215	Rho GTPase activating protein 35a.	Protein kinase domain-containing protein.	0.454
Arhgap35	LOC108873293	ENSLCAP00010040440	ENSLCAP00010042989	Rho GTPase activating protein 35a.	Tyrosine-protein kinase.	0.454
Arhgap35	LOC108887432	ENSLCAP00010040440	ENSLCAP00010057002	Rho GTPase activating protein 35a.	Tyrosine-protein kinase.	0.454
Arhgap35	LOC108893569	ENSLCAP00010040440	ENSLCAP00010051288	Rho GTPase activating protein 35a.	Uncharacterized protein.	0.901
Arhgap35	Rasa1	ENSLCAP00010040440	ENSLCAP00010059954	Rho GTPase activating protein 35a.	RAS p21 protein activator (GTPase activating protein) 1a.	0.907
CSDE1	ENSLCAP00010038775	ENSLCAP00010012243	ENSLCAP00010038775	Uncharacterized protein.	Uncharacterized protein.	0.537
CSDE1	ENSLCAP00010042966	ENSLCAP00010012243	ENSLCAP00010042966	Uncharacterized protein.	Receptor protein-tyrosine kinase.	0.537
CSDE1	ENSLCAP00010045215	ENSLCAP00010012243	ENSLCAP00010045215	Uncharacterized protein.	Protein kinase domain-containing protein.	0.419
CSDE1	ENSLCAP00010046672	ENSLCAP00010012243	ENSLCAP00010046672	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.447
CSDE1	ENSLCAP00010047128	ENSLCAP00010012243	ENSLCAP00010047128	Uncharacterized protein.	Epidermal growth factor.	0.507
CSDE1	LOC108873293	ENSLCAP00010012243	ENSLCAP00010042989	Uncharacterized protein.	Tyrosine-protein kinase.	0.419
CSDE1	LOC108874127	ENSLCAP00010012243	ENSLCAP00010008226	Uncharacterized protein.	EGF-like domain-containing protein.	0.433
CSDE1	LOC108876575	ENSLCAP00010012243	ENSLCAP00010049184	Uncharacterized protein.	Protein kinase domain-containing protein.	0.537
CSDE1	LOC108876789	ENSLCAP00010012243	ENSLCAP00010031146	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.427
CSDE1	LOC108876789-2	ENSLCAP00010012243	ENSLCAP00010046809	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.427
CSDE1	LOC108882842	ENSLCAP00010012243	ENSLCAP00010018851	Uncharacterized protein.	EGF-like domain-containing protein.	0.439
CSDE1	LOC108883656	ENSLCAP00010012243	ENSLCAP00010046378	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.427
CSDE1	LOC108887432	ENSLCAP00010012243	ENSLCAP00010057002	Uncharacterized protein.	Tyrosine-protein kinase.	0.419
CSDE1	LOC108894667	ENSLCAP00010012243	ENSLCAP00010015700	Uncharacterized protein.	Receptor protein-tyrosine kinase.	0.537