STRINGSTRING
LOC108875423 LOC108875423 ENSLCAP00010058119 ENSLCAP00010058119 LOC108895937 LOC108895937 ENSLCAP00010051261 ENSLCAP00010051261 cflar cflar ENSLCAP00010036940 ENSLCAP00010036940
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC108875423Uncharacterized protein. (654 aa)
ENSLCAP00010058119MALT paracaspase 2. (565 aa)
LOC108895937Uncharacterized protein; Belongs to the peptidase C14A family. (273 aa)
ENSLCAP00010051261Uncharacterized protein; Belongs to the peptidase C14A family. (273 aa)
cflarUncharacterized protein; Belongs to the peptidase C14A family. (516 aa)
ENSLCAP00010036940MALT paracaspase 1. (806 aa)
Your Current Organism:
Lates calcarifer
NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch
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