STRINGSTRING
LOC108876160 LOC108876160 inip inip tgfb2 tgfb2 Mylpf Mylpf LOC108890423 LOC108890423 TGFB3 TGFB3 ENSLCAP00010038756 ENSLCAP00010038756 LOC108873145 LOC108873145 DMD DMD tgfb3 tgfb3 LOC108872574 LOC108872574 mstn mstn LOC108888483 LOC108888483 LOC108898929 LOC108898929
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC108876160Transforming growth factor beta; Belongs to the TGF-beta family. (386 aa)
inipUncharacterized protein. (102 aa)
tgfb2Transforming growth factor beta; Belongs to the TGF-beta family. (444 aa)
MylpfMyosin light chain, phosphorylatable, fast skeletal muscle a. (192 aa)
LOC108890423Uncharacterized protein. (176 aa)
TGFB3Transforming growth factor beta; Belongs to the TGF-beta family. (408 aa)
ENSLCAP00010038756Prolactin. (240 aa)
LOC108873145Myostatin-2. (359 aa)
DMDDystrophin; May play a role in anchoring the cytoskeleton to the plasma membrane. (3518 aa)
tgfb3Transforming growth factor beta; Belongs to the TGF-beta family. (405 aa)
LOC108872574Transforming growth factor beta; Belongs to the TGF-beta family. (420 aa)
mstnTGF_BETA_2 domain-containing protein. (376 aa)
LOC108888483Uncharacterized protein. (225 aa)
LOC108898929TGF_BETA_2 domain-containing protein. (389 aa)
Your Current Organism:
Lates calcarifer
NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch
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