STRINGSTRING
Rmi2 Rmi2 rmi1 rmi1 fancg fancg eme1 eme1 cul1 cul1 ENSLCAP00010053132 ENSLCAP00010053132 Fancd2 Fancd2 fancm fancm ercc1 ercc1 ENSLCAP00010043844 ENSLCAP00010043844 rad50 rad50 LOC108880436 LOC108880436 brca1 brca1 pcna pcna fancc fancc Ercc4 Ercc4 mus81 mus81 fance fance fan1 fan1 Poln Poln ENSLCAP00010021231 ENSLCAP00010021231 skp1 skp1 ENSLCAP00010031739 ENSLCAP00010031739 Fanci Fanci rad51c rad51c faap24 faap24
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Rmi2RecQ mediated genome instability 2. (91 aa)
rmi1DUF1767 domain-containing protein. (700 aa)
fancgUncharacterized protein. (627 aa)
eme1ERCC4 domain-containing protein. (571 aa)
cul1CULLIN_2 domain-containing protein; Belongs to the cullin family. (776 aa)
ENSLCAP00010053132Ubiquitin carboxyl-terminal hydrolase. (763 aa)
Fancd2FA complementation group D2. (1422 aa)
fancmUncharacterized protein. (2146 aa)
ercc1Uncharacterized protein. (360 aa)
ENSLCAP00010043844FA complementation group L. (375 aa)
rad50Zinc-hook domain-containing protein. (1313 aa)
LOC108880436Uncharacterized protein. (814 aa)
brca1Uncharacterized protein. (1411 aa)
pcnaProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (260 aa)
fanccUncharacterized protein. (589 aa)
Ercc4Excision repair cross-complementation group 4. (889 aa)
mus81ERCC4 domain-containing protein. (622 aa)
fanceFA_FANCE domain-containing protein. (509 aa)
fan1Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. (1012 aa)
PolnDNA_pol_P_Exo domain-containing protein. (1047 aa)
ENSLCAP00010021231FA complementation group F. (280 aa)
skp1Uncharacterized protein; Belongs to the SKP1 family. (163 aa)
ENSLCAP00010031739Ubiquitin specific peptidase 1; Belongs to the peptidase C19 family. (626 aa)
FanciFA complementation group I. (1288 aa)
rad51cRECA_2 domain-containing protein. (381 aa)
faap24Uncharacterized protein. (217 aa)
Your Current Organism:
Lates calcarifer
NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.