7 items (Lates calcarifer) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Cdt1	Chromatin licensing and DNA replication factor 1. (482 aa)
	mcm10	Mcm10 domain-containing protein. (908 aa)
	cdk2-2	Cyclin-dependent kinase 2. (298 aa)
	cdk2	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (298 aa)
	mcm4	DNA helicase; Belongs to the MCM family. (860 aa)
	cdc45	Uncharacterized protein. (568 aa)
	dbf4	Uncharacterized protein. (628 aa)

Your Current Organism:

Lates calcarifer

NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Cdt1	cdc45	ENSLCAP00010000317	ENSLCAP00010007031	Chromatin licensing and DNA replication factor 1.	Uncharacterized protein.	0.986
Cdt1	cdk2	ENSLCAP00010000317	ENSLCAP00010014041	Chromatin licensing and DNA replication factor 1.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.823
Cdt1	cdk2-2	ENSLCAP00010000317	ENSLCAP00010044385	Chromatin licensing and DNA replication factor 1.	Cyclin-dependent kinase 2.	0.823
Cdt1	dbf4	ENSLCAP00010000317	ENSLCAP00010003550	Chromatin licensing and DNA replication factor 1.	Uncharacterized protein.	0.914
Cdt1	mcm10	ENSLCAP00010000317	ENSLCAP00010046085	Chromatin licensing and DNA replication factor 1.	Mcm10 domain-containing protein.	0.997
Cdt1	mcm4	ENSLCAP00010000317	ENSLCAP00010011193	Chromatin licensing and DNA replication factor 1.	DNA helicase; Belongs to the MCM family.	0.999
cdc45	Cdt1	ENSLCAP00010007031	ENSLCAP00010000317	Uncharacterized protein.	Chromatin licensing and DNA replication factor 1.	0.986
cdc45	cdk2	ENSLCAP00010007031	ENSLCAP00010014041	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.795
cdc45	cdk2-2	ENSLCAP00010007031	ENSLCAP00010044385	Uncharacterized protein.	Cyclin-dependent kinase 2.	0.795
cdc45	dbf4	ENSLCAP00010007031	ENSLCAP00010003550	Uncharacterized protein.	Uncharacterized protein.	0.948
cdc45	mcm10	ENSLCAP00010007031	ENSLCAP00010046085	Uncharacterized protein.	Mcm10 domain-containing protein.	0.998
cdc45	mcm4	ENSLCAP00010007031	ENSLCAP00010011193	Uncharacterized protein.	DNA helicase; Belongs to the MCM family.	0.999
cdk2	Cdt1	ENSLCAP00010014041	ENSLCAP00010000317	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Chromatin licensing and DNA replication factor 1.	0.823
cdk2	cdc45	ENSLCAP00010014041	ENSLCAP00010007031	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.795
cdk2	dbf4	ENSLCAP00010014041	ENSLCAP00010003550	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.715
cdk2	mcm10	ENSLCAP00010014041	ENSLCAP00010046085	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Mcm10 domain-containing protein.	0.736
cdk2	mcm4	ENSLCAP00010014041	ENSLCAP00010011193	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	DNA helicase; Belongs to the MCM family.	0.816
cdk2-2	Cdt1	ENSLCAP00010044385	ENSLCAP00010000317	Cyclin-dependent kinase 2.	Chromatin licensing and DNA replication factor 1.	0.823
cdk2-2	cdc45	ENSLCAP00010044385	ENSLCAP00010007031	Cyclin-dependent kinase 2.	Uncharacterized protein.	0.795
cdk2-2	dbf4	ENSLCAP00010044385	ENSLCAP00010003550	Cyclin-dependent kinase 2.	Uncharacterized protein.	0.715