8 items (Lates calcarifer) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
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gene neighborhood

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textmining

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protein homology

Your Input:
	samhd1	Uncharacterized protein. (623 aa)
	Rnaseh2c	Ribonuclease H2, subunit C. (107 aa)
	ENSLCAP00010037861	Caspase 3, apoptosis-related cysteine peptidase a; Belongs to the peptidase C14A family. (279 aa)
	rnaseh2b	Uncharacterized protein. (306 aa)
	pcna	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (260 aa)
	LOC108901713	Uncharacterized protein. (1066 aa)
	CASP3	Caspase 3, apoptosis-related cysteine peptidase b; Belongs to the peptidase C14A family. (259 aa)
	Rnaseh2a	Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. (311 aa)

Your Current Organism:

Lates calcarifer

NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CASP3	ENSLCAP00010037861	ENSLCAP00010058548	ENSLCAP00010037861	Caspase 3, apoptosis-related cysteine peptidase b; Belongs to the peptidase C14A family.	Caspase 3, apoptosis-related cysteine peptidase a; Belongs to the peptidase C14A family.	0.902
ENSLCAP00010037861	CASP3	ENSLCAP00010037861	ENSLCAP00010058548	Caspase 3, apoptosis-related cysteine peptidase a; Belongs to the peptidase C14A family.	Caspase 3, apoptosis-related cysteine peptidase b; Belongs to the peptidase C14A family.	0.902
ENSLCAP00010037861	LOC108901713	ENSLCAP00010037861	ENSLCAP00010004675	Caspase 3, apoptosis-related cysteine peptidase a; Belongs to the peptidase C14A family.	Uncharacterized protein.	0.412
LOC108901713	ENSLCAP00010037861	ENSLCAP00010004675	ENSLCAP00010037861	Uncharacterized protein.	Caspase 3, apoptosis-related cysteine peptidase a; Belongs to the peptidase C14A family.	0.412
Rnaseh2a	Rnaseh2c	ENSLCAP00010055397	ENSLCAP00010043655	Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.	Ribonuclease H2, subunit C.	0.980
Rnaseh2a	pcna	ENSLCAP00010055397	ENSLCAP00010007860	Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.967
Rnaseh2a	rnaseh2b	ENSLCAP00010055397	ENSLCAP00010021417	Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.	Uncharacterized protein.	0.999
Rnaseh2a	samhd1	ENSLCAP00010055397	ENSLCAP00010046259	Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.	Uncharacterized protein.	0.637
Rnaseh2c	Rnaseh2a	ENSLCAP00010043655	ENSLCAP00010055397	Ribonuclease H2, subunit C.	Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.	0.980
Rnaseh2c	rnaseh2b	ENSLCAP00010043655	ENSLCAP00010021417	Ribonuclease H2, subunit C.	Uncharacterized protein.	0.988
Rnaseh2c	samhd1	ENSLCAP00010043655	ENSLCAP00010046259	Ribonuclease H2, subunit C.	Uncharacterized protein.	0.665
pcna	Rnaseh2a	ENSLCAP00010007860	ENSLCAP00010055397	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.	0.967
pcna	rnaseh2b	ENSLCAP00010007860	ENSLCAP00010021417	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	Uncharacterized protein.	0.821
rnaseh2b	Rnaseh2a	ENSLCAP00010021417	ENSLCAP00010055397	Uncharacterized protein.	Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.	0.999
rnaseh2b	Rnaseh2c	ENSLCAP00010021417	ENSLCAP00010043655	Uncharacterized protein.	Ribonuclease H2, subunit C.	0.988
rnaseh2b	pcna	ENSLCAP00010021417	ENSLCAP00010007860	Uncharacterized protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.821
rnaseh2b	samhd1	ENSLCAP00010021417	ENSLCAP00010046259	Uncharacterized protein.	Uncharacterized protein.	0.623
samhd1	Rnaseh2a	ENSLCAP00010046259	ENSLCAP00010055397	Uncharacterized protein.	Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.	0.637
samhd1	Rnaseh2c	ENSLCAP00010046259	ENSLCAP00010043655	Uncharacterized protein.	Ribonuclease H2, subunit C.	0.665
samhd1	rnaseh2b	ENSLCAP00010046259	ENSLCAP00010021417	Uncharacterized protein.	Uncharacterized protein.	0.623