18 items (Lates calcarifer) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSLCAP00010003222	Solute carrier family 7 (cationic amino acid transporter, y+ system), member 2. (641 aa)
	Fem1b	Fem-1 homolog b (C. elegans). (616 aa)
	dmrt3	DM domain-containing protein. (474 aa)
	Otc	Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. (421 aa)
	wnt4	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (352 aa)
	GATA2	GATA binding protein 2. (458 aa)
	FEM1A	Uncharacterized protein. (617 aa)
	ccn2	Uncharacterized protein. (346 aa)
	wnt1	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (370 aa)
	ctnnb1	Uncharacterized protein. (796 aa)
	AMHR2	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (473 aa)
	fgf16	Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (217 aa)
	CYP19A1	Cytochrome P450 family 19 subfamily A member 1; Belongs to the cytochrome P450 family. (504 aa)
	ENSLCAP00010015991	Follistatin-like 5. (835 aa)
	dnali1	Uncharacterized protein. (294 aa)
	fstl3	Uncharacterized protein. (295 aa)
	ENSLCAP00010003980	Sad1 and UNC84 domain containing 1. (792 aa)
	Sun1	Uncharacterized protein. (240 aa)

Your Current Organism:

Lates calcarifer

NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AMHR2	dmrt3	ENSLCAP00010036327	ENSLCAP00010050579	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	DM domain-containing protein.	0.471
CYP19A1	FEM1A	ENSLCAP00010020214	ENSLCAP00010040517	Cytochrome P450 family 19 subfamily A member 1; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.437
CYP19A1	Fem1b	ENSLCAP00010020214	ENSLCAP00010049278	Cytochrome P450 family 19 subfamily A member 1; Belongs to the cytochrome P450 family.	Fem-1 homolog b (C. elegans).	0.443
CYP19A1	dmrt3	ENSLCAP00010020214	ENSLCAP00010050579	Cytochrome P450 family 19 subfamily A member 1; Belongs to the cytochrome P450 family.	DM domain-containing protein.	0.465
CYP19A1	fgf16	ENSLCAP00010020214	ENSLCAP00010032353	Cytochrome P450 family 19 subfamily A member 1; Belongs to the cytochrome P450 family.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.417
CYP19A1	wnt4	ENSLCAP00010020214	ENSLCAP00010050154	Cytochrome P450 family 19 subfamily A member 1; Belongs to the cytochrome P450 family.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.586
ENSLCAP00010003222	ENSLCAP00010003980	ENSLCAP00010003222	ENSLCAP00010003980	Solute carrier family 7 (cationic amino acid transporter, y+ system), member 2.	Sad1 and UNC84 domain containing 1.	0.573
ENSLCAP00010003222	FEM1A	ENSLCAP00010003222	ENSLCAP00010040517	Solute carrier family 7 (cationic amino acid transporter, y+ system), member 2.	Uncharacterized protein.	0.420
ENSLCAP00010003222	Fem1b	ENSLCAP00010003222	ENSLCAP00010049278	Solute carrier family 7 (cationic amino acid transporter, y+ system), member 2.	Fem-1 homolog b (C. elegans).	0.427
ENSLCAP00010003222	Otc	ENSLCAP00010003222	ENSLCAP00010050983	Solute carrier family 7 (cationic amino acid transporter, y+ system), member 2.	Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.	0.511
ENSLCAP00010003222	Sun1	ENSLCAP00010003222	ENSLCAP00010003960	Solute carrier family 7 (cationic amino acid transporter, y+ system), member 2.	Uncharacterized protein.	0.573
ENSLCAP00010003222	dnali1	ENSLCAP00010003222	ENSLCAP00010007142	Solute carrier family 7 (cationic amino acid transporter, y+ system), member 2.	Uncharacterized protein.	0.474
ENSLCAP00010003222	fgf16	ENSLCAP00010003222	ENSLCAP00010032353	Solute carrier family 7 (cationic amino acid transporter, y+ system), member 2.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.409
ENSLCAP00010003980	ENSLCAP00010003222	ENSLCAP00010003980	ENSLCAP00010003222	Sad1 and UNC84 domain containing 1.	Solute carrier family 7 (cationic amino acid transporter, y+ system), member 2.	0.573
ENSLCAP00010003980	FEM1A	ENSLCAP00010003980	ENSLCAP00010040517	Sad1 and UNC84 domain containing 1.	Uncharacterized protein.	0.417
ENSLCAP00010003980	Fem1b	ENSLCAP00010003980	ENSLCAP00010049278	Sad1 and UNC84 domain containing 1.	Fem-1 homolog b (C. elegans).	0.418
ENSLCAP00010003980	Otc	ENSLCAP00010003980	ENSLCAP00010050983	Sad1 and UNC84 domain containing 1.	Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.	0.478
ENSLCAP00010003980	Sun1	ENSLCAP00010003980	ENSLCAP00010003960	Sad1 and UNC84 domain containing 1.	Uncharacterized protein.	0.929
ENSLCAP00010003980	ctnnb1	ENSLCAP00010003980	ENSLCAP00010036719	Sad1 and UNC84 domain containing 1.	Uncharacterized protein.	0.405
ENSLCAP00010003980	dnali1	ENSLCAP00010003980	ENSLCAP00010007142	Sad1 and UNC84 domain containing 1.	Uncharacterized protein.	0.478