9 items (Lates calcarifer) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Pax2	Paired domain-containing protein. (392 aa)
	TLX3	T cell leukemia homeobox 3. (283 aa)
	LOC108888751	CAP-Gly domain-containing protein. (1246 aa)
	ENSLCAP00010037861	Caspase 3, apoptosis-related cysteine peptidase a; Belongs to the peptidase C14A family. (279 aa)
	PAX2	Paired box 2. (402 aa)
	Cdk1	Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily. (331 aa)
	pcna	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (260 aa)
	foxm1	Fork-head domain-containing protein. (678 aa)
	CASP3	Caspase 3, apoptosis-related cysteine peptidase b; Belongs to the peptidase C14A family. (259 aa)

Your Current Organism:

Lates calcarifer

NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CASP3	ENSLCAP00010037861	ENSLCAP00010058548	ENSLCAP00010037861	Caspase 3, apoptosis-related cysteine peptidase b; Belongs to the peptidase C14A family.	Caspase 3, apoptosis-related cysteine peptidase a; Belongs to the peptidase C14A family.	0.902
CASP3	TLX3	ENSLCAP00010058548	ENSLCAP00010039185	Caspase 3, apoptosis-related cysteine peptidase b; Belongs to the peptidase C14A family.	T cell leukemia homeobox 3.	0.406
Cdk1	foxm1	ENSLCAP00010028139	ENSLCAP00010005535	Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily.	Fork-head domain-containing protein.	0.727
Cdk1	pcna	ENSLCAP00010028139	ENSLCAP00010007860	Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.606
ENSLCAP00010037861	CASP3	ENSLCAP00010037861	ENSLCAP00010058548	Caspase 3, apoptosis-related cysteine peptidase a; Belongs to the peptidase C14A family.	Caspase 3, apoptosis-related cysteine peptidase b; Belongs to the peptidase C14A family.	0.902
ENSLCAP00010037861	TLX3	ENSLCAP00010037861	ENSLCAP00010039185	Caspase 3, apoptosis-related cysteine peptidase a; Belongs to the peptidase C14A family.	T cell leukemia homeobox 3.	0.408
LOC108888751	PAX2	ENSLCAP00010038393	ENSLCAP00010034341	CAP-Gly domain-containing protein.	Paired box 2.	0.402
LOC108888751	Pax2	ENSLCAP00010038393	ENSLCAP00010045460	CAP-Gly domain-containing protein.	Paired domain-containing protein.	0.402
LOC108888751	TLX3	ENSLCAP00010038393	ENSLCAP00010039185	CAP-Gly domain-containing protein.	T cell leukemia homeobox 3.	0.538
PAX2	LOC108888751	ENSLCAP00010034341	ENSLCAP00010038393	Paired box 2.	CAP-Gly domain-containing protein.	0.402
PAX2	TLX3	ENSLCAP00010034341	ENSLCAP00010039185	Paired box 2.	T cell leukemia homeobox 3.	0.571
Pax2	LOC108888751	ENSLCAP00010045460	ENSLCAP00010038393	Paired domain-containing protein.	CAP-Gly domain-containing protein.	0.402
Pax2	TLX3	ENSLCAP00010045460	ENSLCAP00010039185	Paired domain-containing protein.	T cell leukemia homeobox 3.	0.571
TLX3	CASP3	ENSLCAP00010039185	ENSLCAP00010058548	T cell leukemia homeobox 3.	Caspase 3, apoptosis-related cysteine peptidase b; Belongs to the peptidase C14A family.	0.406
TLX3	ENSLCAP00010037861	ENSLCAP00010039185	ENSLCAP00010037861	T cell leukemia homeobox 3.	Caspase 3, apoptosis-related cysteine peptidase a; Belongs to the peptidase C14A family.	0.408
TLX3	LOC108888751	ENSLCAP00010039185	ENSLCAP00010038393	T cell leukemia homeobox 3.	CAP-Gly domain-containing protein.	0.538
TLX3	PAX2	ENSLCAP00010039185	ENSLCAP00010034341	T cell leukemia homeobox 3.	Paired box 2.	0.571
TLX3	Pax2	ENSLCAP00010039185	ENSLCAP00010045460	T cell leukemia homeobox 3.	Paired domain-containing protein.	0.571
foxm1	Cdk1	ENSLCAP00010005535	ENSLCAP00010028139	Fork-head domain-containing protein.	Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily.	0.727
pcna	Cdk1	ENSLCAP00010007860	ENSLCAP00010028139	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily.	0.606