STRINGSTRING
cebpa cebpa ENSLCAP00010013175 ENSLCAP00010013175 CAPN6 CAPN6 TPM1 TPM1 irf2 irf2 traf6 traf6 TLR2 TLR2 LOC108872711 LOC108872711 LOC108881392 LOC108881392 CASP3 CASP3 casp9 casp9 ENSLCAP00010037861 ENSLCAP00010037861 LOC108897062 LOC108897062 il10 il10 myd88 myd88 LOC108893553 LOC108893553
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
cebpaCCAAT/enhancer-binding protein. (304 aa)
ENSLCAP00010013175Defensin, beta-like 2. (71 aa)
CAPN6Calpain 6; Belongs to the peptidase C2 family. (649 aa)
TPM1Uncharacterized protein; Belongs to the tropomyosin family. (284 aa)
irf2Interferon regulatory factor. (335 aa)
traf6TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (609 aa)
TLR2Toll like receptor 2. (689 aa)
LOC108872711Uncharacterized protein; Belongs to the peptidase C2 family. (637 aa)
LOC108881392Uncharacterized protein; Belongs to the tropomyosin family. (284 aa)
CASP3Caspase 3, apoptosis-related cysteine peptidase b; Belongs to the peptidase C14A family. (259 aa)
casp9Uncharacterized protein; Belongs to the peptidase C14A family. (457 aa)
ENSLCAP00010037861Caspase 3, apoptosis-related cysteine peptidase a; Belongs to the peptidase C14A family. (279 aa)
LOC108897062Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family. (718 aa)
il10Uncharacterized protein. (187 aa)
myd88Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response. (292 aa)
LOC108893553Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family. (646 aa)
Your Current Organism:
Lates calcarifer
NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.