21 items (Lates calcarifer) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSLCAP00010004286	Wee1-like protein kinase. (540 aa)
	btk	Tyrosine-protein kinase. (636 aa)
	LOC108884881	BH4_2 domain-containing protein. (232 aa)
	casp9	Uncharacterized protein; Belongs to the peptidase C14A family. (457 aa)
	CASP3	Caspase 3, apoptosis-related cysteine peptidase b; Belongs to the peptidase C14A family. (259 aa)
	Cxcl14	Chemokine (C-X-C motif) ligand 14. (95 aa)
	ENSLCAP00010043807	Toll-like receptor 9; Belongs to the Toll-like receptor family. (1060 aa)
	ENSLCAP00010041894	Fibrinogen gamma chain. (387 aa)
	ENSLCAP00010041794	Fibrinogen gamma chain. (479 aa)
	LOC108875304	L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily. (334 aa)
	gpi	Glucose-6-phosphate isomerase; Belongs to the GPI family. (578 aa)
	Cdk1	Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily. (331 aa)
	syk	Tyrosine-protein kinase. (620 aa)
	ran	GTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (242 aa)
	LOC108885399	SCY domain-containing protein; Belongs to the intercrine alpha (chemokine CxC) family. (102 aa)
	blnk	SH2 domain-containing protein. (514 aa)
	ENSLCAP00010020699	Von Willebrand factor. (2810 aa)
	chek1	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (486 aa)
	casp6	Uncharacterized protein; Belongs to the peptidase C14A family. (301 aa)
	prpf19	Uncharacterized protein. (505 aa)
	wee1	Wee1-like protein kinase. (620 aa)

Your Current Organism:

Lates calcarifer

NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CASP3	LOC108884881	ENSLCAP00010058548	ENSLCAP00010001507	Caspase 3, apoptosis-related cysteine peptidase b; Belongs to the peptidase C14A family.	BH4_2 domain-containing protein.	0.671
CASP3	casp9	ENSLCAP00010058548	ENSLCAP00010059818	Caspase 3, apoptosis-related cysteine peptidase b; Belongs to the peptidase C14A family.	Uncharacterized protein; Belongs to the peptidase C14A family.	0.973
Cdk1	ENSLCAP00010004286	ENSLCAP00010028139	ENSLCAP00010004286	Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily.	Wee1-like protein kinase.	0.766
Cdk1	chek1	ENSLCAP00010028139	ENSLCAP00010020211	Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.664
Cdk1	wee1	ENSLCAP00010028139	ENSLCAP00010005543	Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily.	Wee1-like protein kinase.	0.974
Cxcl14	LOC108885399	ENSLCAP00010056499	ENSLCAP00010023816	Chemokine (C-X-C motif) ligand 14.	SCY domain-containing protein; Belongs to the intercrine alpha (chemokine CxC) family.	0.948
Cxcl14	blnk	ENSLCAP00010056499	ENSLCAP00010021702	Chemokine (C-X-C motif) ligand 14.	SH2 domain-containing protein.	0.511
Cxcl14	btk	ENSLCAP00010056499	ENSLCAP00010002676	Chemokine (C-X-C motif) ligand 14.	Tyrosine-protein kinase.	0.511
Cxcl14	syk	ENSLCAP00010056499	ENSLCAP00010025396	Chemokine (C-X-C motif) ligand 14.	Tyrosine-protein kinase.	0.511
ENSLCAP00010004286	Cdk1	ENSLCAP00010004286	ENSLCAP00010028139	Wee1-like protein kinase.	Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily.	0.766
ENSLCAP00010004286	ENSLCAP00010041794	ENSLCAP00010004286	ENSLCAP00010041794	Wee1-like protein kinase.	Fibrinogen gamma chain.	0.403
ENSLCAP00010004286	ENSLCAP00010041894	ENSLCAP00010004286	ENSLCAP00010041894	Wee1-like protein kinase.	Fibrinogen gamma chain.	0.403
ENSLCAP00010004286	btk	ENSLCAP00010004286	ENSLCAP00010002676	Wee1-like protein kinase.	Tyrosine-protein kinase.	0.408
ENSLCAP00010004286	chek1	ENSLCAP00010004286	ENSLCAP00010020211	Wee1-like protein kinase.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.903
ENSLCAP00010004286	prpf19	ENSLCAP00010004286	ENSLCAP00010006798	Wee1-like protein kinase.	Uncharacterized protein.	0.402
ENSLCAP00010004286	ran	ENSLCAP00010004286	ENSLCAP00010024131	Wee1-like protein kinase.	GTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	0.408
ENSLCAP00010004286	syk	ENSLCAP00010004286	ENSLCAP00010025396	Wee1-like protein kinase.	Tyrosine-protein kinase.	0.421
ENSLCAP00010020699	ENSLCAP00010041794	ENSLCAP00010020699	ENSLCAP00010041794	Von Willebrand factor.	Fibrinogen gamma chain.	0.610
ENSLCAP00010020699	ENSLCAP00010041894	ENSLCAP00010020699	ENSLCAP00010041894	Von Willebrand factor.	Fibrinogen gamma chain.	0.610
ENSLCAP00010020699	gpi	ENSLCAP00010020699	ENSLCAP00010034122	Von Willebrand factor.	Glucose-6-phosphate isomerase; Belongs to the GPI family.	0.576