STRINGSTRING
LOC108883956 LOC108883956 CASP3 CASP3 star star LOC108886974 LOC108886974 nfe2 nfe2 hmgcr hmgcr nod1 nod1 GOT1 GOT1 ENSLCAP00010037861 ENSLCAP00010037861 LOC108888247 LOC108888247 nfe2l2 nfe2l2 ENSLCAP00010030561 ENSLCAP00010030561 elovl5 elovl5 ENSLCAP00010028099 ENSLCAP00010028099 il10 il10 gapdh gapdh drosha drosha ENSLCAP00010015481 ENSLCAP00010015481 got1 got1 LOC108873800 LOC108873800 got2 got2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC108883956Uncharacterized protein. (337 aa)
CASP3Caspase 3, apoptosis-related cysteine peptidase b; Belongs to the peptidase C14A family. (259 aa)
starSteroidogenic acute regulatory protein, mitochondrial; Plays a key role in steroid hormone synthesis by enhancing the metabolism of cholesterol into pregnenolone. Mediates the transfer of cholesterol from the outer mitochondrial membrane to the inner mitochondrial membrane where it is cleaved to pregnenolone. (286 aa)
LOC108886974Glyceraldehyde-3-phosphate dehydrogenase. (347 aa)
nfe2BZIP domain-containing protein. (491 aa)
hmgcr3-hydroxy-3-methylglutaryl coenzyme A reductase. (890 aa)
nod1Uncharacterized protein. (939 aa)
GOT1Aspartate aminotransferase. (467 aa)
ENSLCAP00010037861Caspase 3, apoptosis-related cysteine peptidase a; Belongs to the peptidase C14A family. (279 aa)
LOC108888247Glyceraldehyde-3-phosphate dehydrogenase. (358 aa)
nfe2l2BZIP domain-containing protein. (612 aa)
ENSLCAP00010030561Uncharacterized protein. (1653 aa)
elovl5Elongation of very long chain fatty acids protein 5; Catalyzes the first and rate-limiting reaction of the four reactions that constitute the long-chain fatty acids elongation cycle. This endoplasmic reticulum-bound enzymatic process allows the addition of 2 carbons to the chain of long- and very long-chain fatty acids (VLCFAs) per cycle. Condensing enzyme that acts specifically toward polyunsaturated acyl-CoA with the higher activity toward C18:3(n-6) acyl-CoA. May participate to the production of monounsaturated and of polyunsaturated VLCFAs of different chain lengths that are involv [...] (294 aa)
ENSLCAP00010028099Cytochrome P450, family 17, subfamily A, polypeptide 1; Belongs to the cytochrome P450 family. (504 aa)
il10Uncharacterized protein. (187 aa)
gapdhGlyceraldehyde-3-phosphate dehydrogenase. (339 aa)
droshaUncharacterized protein. (1304 aa)
ENSLCAP00010015481Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (475 aa)
got1Aspartate aminotransferase. (410 aa)
LOC1088738003-hydroxy-3-methylglutaryl coenzyme A reductase. (879 aa)
got2Aspartate aminotransferase. (428 aa)
Your Current Organism:
Lates calcarifer
NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch
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