STRINGSTRING
rabif rabif LOC108888922 LOC108888922 il10 il10 ENSLCAP00010026213 ENSLCAP00010026213 DDX41 DDX41 TGFB3 TGFB3 LOC108876160 LOC108876160 Mospd2 Mospd2 tgfb2 tgfb2 LOC108887078 LOC108887078 tgfb3 tgfb3 LOC108872574 LOC108872574
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rabifUncharacterized protein. (130 aa)
LOC108888922G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (370 aa)
il10Uncharacterized protein. (187 aa)
ENSLCAP00010026213Growth hormone secretagogue receptor b; Belongs to the G-protein coupled receptor 1 family. (386 aa)
DDX41Uncharacterized protein. (617 aa)
TGFB3Transforming growth factor beta; Belongs to the TGF-beta family. (408 aa)
LOC108876160Transforming growth factor beta; Belongs to the TGF-beta family. (386 aa)
Mospd2Motile sperm domain containing 2. (504 aa)
tgfb2Transforming growth factor beta; Belongs to the TGF-beta family. (444 aa)
LOC108887078G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (383 aa)
tgfb3Transforming growth factor beta; Belongs to the TGF-beta family. (405 aa)
LOC108872574Transforming growth factor beta; Belongs to the TGF-beta family. (420 aa)
Your Current Organism:
Lates calcarifer
NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.