31 items (Lates calcarifer) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PLK1	Serine/threonine-protein kinase PLK. (569 aa)
	cdk2-2	Cyclin-dependent kinase 2. (298 aa)
	LOC108872509	Histone H3; Belongs to the histone H3 family. (136 aa)
	ccna2	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (436 aa)
	ENSLCAP00010050497	Histone H3; Belongs to the histone H3 family. (90 aa)
	ccnb1	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (404 aa)
	Ccnf	Cyclin F; Belongs to the cyclin family. (768 aa)
	MYBL2	Uncharacterized protein. (907 aa)
	LOC108901713	Uncharacterized protein. (1066 aa)
	foxm1	Fork-head domain-containing protein. (678 aa)
	wee1	Wee1-like protein kinase. (620 aa)
	cdc45	Uncharacterized protein. (568 aa)
	pcna	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (260 aa)
	cdk2	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (298 aa)
	lin54	CRC domain-containing protein. (813 aa)
	Lin37	Lin-37 DREAM MuvB core complex component. (233 aa)
	ENSLCAP00010018787	Histone H3; Belongs to the histone H3 family. (117 aa)
	mybl2	Uncharacterized protein. (637 aa)
	ENSLCAP00010020695	Retinoblastoma binding protein 4. (456 aa)
	lin9	DIRP domain-containing protein. (548 aa)
	gapdh	Glyceraldehyde-3-phosphate dehydrogenase. (339 aa)
	ENSLCAP00010026315	Histone H3; Belongs to the histone H3 family. (98 aa)
	ENSLCAP00010026403	Histone H3; Belongs to the histone H3 family. (107 aa)
	Cdc25b	Rhodanese domain-containing protein. (385 aa)
	Cdk1	Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily. (331 aa)
	ENSLCAP00010029507	Histone H3; Belongs to the histone H3 family. (125 aa)
	ENSLCAP00010029530	Histone H3; Belongs to the histone H3 family. (98 aa)
	ENSLCAP00010031816	Granulin a. (787 aa)
	kras	Uncharacterized protein. (189 aa)
	ENSLCAP00010041597	Histone H3; Belongs to the histone H3 family. (88 aa)
	lin52	Uncharacterized protein. (112 aa)

Your Current Organism:

Lates calcarifer

NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Ccnf	Cdc25b	ENSLCAP00010000303	ENSLCAP00010028000	Cyclin F; Belongs to the cyclin family.	Rhodanese domain-containing protein.	0.523
Ccnf	Cdk1	ENSLCAP00010000303	ENSLCAP00010028139	Cyclin F; Belongs to the cyclin family.	Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily.	0.678
Ccnf	MYBL2	ENSLCAP00010000303	ENSLCAP00010002744	Cyclin F; Belongs to the cyclin family.	Uncharacterized protein.	0.729
Ccnf	ccna2	ENSLCAP00010000303	ENSLCAP00010056469	Cyclin F; Belongs to the cyclin family.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.426
Ccnf	ccnb1	ENSLCAP00010000303	ENSLCAP00010049414	Cyclin F; Belongs to the cyclin family.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.498
Ccnf	cdc45	ENSLCAP00010000303	ENSLCAP00010007031	Cyclin F; Belongs to the cyclin family.	Uncharacterized protein.	0.414
Ccnf	cdk2	ENSLCAP00010000303	ENSLCAP00010014041	Cyclin F; Belongs to the cyclin family.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.602
Ccnf	cdk2-2	ENSLCAP00010000303	ENSLCAP00010044385	Cyclin F; Belongs to the cyclin family.	Cyclin-dependent kinase 2.	0.602
Ccnf	foxm1	ENSLCAP00010000303	ENSLCAP00010005535	Cyclin F; Belongs to the cyclin family.	Fork-head domain-containing protein.	0.685
Ccnf	mybl2	ENSLCAP00010000303	ENSLCAP00010019714	Cyclin F; Belongs to the cyclin family.	Uncharacterized protein.	0.729
Ccnf	pcna	ENSLCAP00010000303	ENSLCAP00010007860	Cyclin F; Belongs to the cyclin family.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.434
Ccnf	wee1	ENSLCAP00010000303	ENSLCAP00010005543	Cyclin F; Belongs to the cyclin family.	Wee1-like protein kinase.	0.670
Cdc25b	Ccnf	ENSLCAP00010028000	ENSLCAP00010000303	Rhodanese domain-containing protein.	Cyclin F; Belongs to the cyclin family.	0.523
Cdc25b	Cdk1	ENSLCAP00010028000	ENSLCAP00010028139	Rhodanese domain-containing protein.	Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily.	0.988
Cdc25b	ENSLCAP00010020695	ENSLCAP00010028000	ENSLCAP00010020695	Rhodanese domain-containing protein.	Retinoblastoma binding protein 4.	0.439
Cdc25b	Lin37	ENSLCAP00010028000	ENSLCAP00010017411	Rhodanese domain-containing protein.	Lin-37 DREAM MuvB core complex component.	0.511
Cdc25b	MYBL2	ENSLCAP00010028000	ENSLCAP00010002744	Rhodanese domain-containing protein.	Uncharacterized protein.	0.457
Cdc25b	PLK1	ENSLCAP00010028000	ENSLCAP00010049256	Rhodanese domain-containing protein.	Serine/threonine-protein kinase PLK.	0.990
Cdc25b	ccna2	ENSLCAP00010028000	ENSLCAP00010056469	Rhodanese domain-containing protein.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.858
Cdc25b	ccnb1	ENSLCAP00010028000	ENSLCAP00010049414	Rhodanese domain-containing protein.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.878