STRINGSTRING
ENSLCAP00010032855 ENSLCAP00010032855 ENSLCAP00010031718 ENSLCAP00010031718 rad52 rad52 ENSLCAP00010030587 ENSLCAP00010030587 Brca2 Brca2 Cdk1 Cdk1 Slx4 Slx4 hus1 hus1 cdk2 cdk2 mus81 mus81 pcna pcna primpol primpol cdc45 cdc45 brca1 brca1 Rmi2 Rmi2 wee1 wee1 foxm1 foxm1 dbf4 dbf4 recql5 recql5 Pold1 Pold1 EME2 EME2 rmi1 rmi1 LOC108882499 LOC108882499 ccna2 ccna2 Dna2 Dna2 eme1 eme1 ENSLCAP00010051068 ENSLCAP00010051068 ccnb1 ccnb1 PLK1 PLK1 cdc7 cdc7 zranb3 zranb3 pif1 pif1 ccna1 ccna1 LOC108895202 LOC108895202 Fancd2 Fancd2 fancm fancm cdk2-2 cdk2-2 ercc1 ercc1 traip traip atrip atrip hras hras Fanci Fanci
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSLCAP00010032855RAD17 checkpoint clamp loader component. (467 aa)
ENSLCAP00010031718DNA topoisomerase II binding protein 1. (1435 aa)
rad52Uncharacterized protein. (435 aa)
ENSLCAP00010030587Helicase-like transcription factor. (813 aa)
Brca2Breast cancer 2, early onset. (2872 aa)
Cdk1Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily. (331 aa)
Slx4Uncharacterized protein. (262 aa)
hus1Checkpoint protein; Belongs to the HUS1 family. (285 aa)
cdk2Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (298 aa)
mus81ERCC4 domain-containing protein. (622 aa)
pcnaProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (260 aa)
primpolUncharacterized protein. (533 aa)
cdc45Uncharacterized protein. (568 aa)
brca1Uncharacterized protein. (1411 aa)
Rmi2RecQ mediated genome instability 2. (91 aa)
wee1Wee1-like protein kinase. (620 aa)
foxm1Fork-head domain-containing protein. (678 aa)
dbf4Uncharacterized protein. (628 aa)
recql5Uncharacterized protein. (1020 aa)
Pold1DNA polymerase. (1098 aa)
EME2ERCC4 domain-containing protein. (443 aa)
rmi1DUF1767 domain-containing protein. (700 aa)
LOC108882499Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family. (573 aa)
ccna2Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (436 aa)
Dna2DNA replication helicase/nuclease 2. (1408 aa)
eme1ERCC4 domain-containing protein. (571 aa)
ENSLCAP00010051068SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1; Belongs to the SNF2/RAD54 helicase family. SMARCAL1 subfamily. (764 aa)
ccnb1Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (404 aa)
PLK1Serine/threonine-protein kinase PLK. (569 aa)
cdc7Protein kinase domain-containing protein. (610 aa)
zranb3Uncharacterized protein. (1161 aa)
pif1ATP-dependent DNA helicase PIF1; DNA-dependent ATPase and 5'-3' DNA helicase required for the maintenance of both mitochondrial and nuclear genome stability. (632 aa)
ccna1Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (416 aa)
LOC108895202Structure-specific endonuclease subunit SLX1; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. (271 aa)
Fancd2FA complementation group D2. (1422 aa)
fancmUncharacterized protein. (2146 aa)
cdk2-2Cyclin-dependent kinase 2. (298 aa)
ercc1Uncharacterized protein. (360 aa)
traipRING-type domain-containing protein. (447 aa)
atripUncharacterized protein. (873 aa)
hrasUncharacterized protein. (189 aa)
FanciFA complementation group I. (1288 aa)
Your Current Organism:
Lates calcarifer
NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch
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