STRINGSTRING
Pou2f2 Pou2f2 ptger4 ptger4 ENSLCAP00010003883 ENSLCAP00010003883 msx1 msx1 sox2 sox2 ENSLCAP00010006659 ENSLCAP00010006659 cenpn cenpn LOC108887913 LOC108887913 wt1 wt1 pgr pgr lef1 lef1 mcm3 mcm3 CSDE1 CSDE1 cunh1orf53 cunh1orf53 mmp9 mmp9 nr2f2 nr2f2 cdk2 cdk2 hsd17b1 hsd17b1 Smc5 Smc5 YBX2 YBX2 ubp1 ubp1 gata4 gata4 CYP19A1 CYP19A1 ENSLCAP00010020557 ENSLCAP00010020557 SMARCE1 SMARCE1 arid3a arid3a ENSLCAP00010023131 ENSLCAP00010023131 LOC108893819 LOC108893819 traf4 traf4 tub tub gtf3a gtf3a LOC108898497 LOC108898497 ENSLCAP00010030391 ENSLCAP00010030391 LHCGR LHCGR Dnd1 Dnd1 zar1 zar1 gdf9 gdf9 Znf407 Znf407 tcf21 tcf21 dazl dazl irx3 irx3 LOC108875238 LOC108875238 LOC108880798 LOC108880798 LOC108887630 LOC108887630 BMPR2 BMPR2 cpeb1 cpeb1 dll4 dll4 LOC108880438 LOC108880438 LOC108876328 LOC108876328 ENSLCAP00010043145 ENSLCAP00010043145 rad50 rad50 tnfaip6 tnfaip6 LOC108895751 LOC108895751 hsp90b1 hsp90b1 cdk2-2 cdk2-2 osr2 osr2 cdk4 cdk4 DLK1 DLK1 inha inha LOC108894392 LOC108894392 bub3 bub3 ACVR1B ACVR1B klf11 klf11 sox11 sox11 tfdp1 tfdp1 nkx3-2 nkx3-2 bmp15 bmp15 LOC108877344 LOC108877344 Cd247 Cd247 sall4 sall4 dnmt1 dnmt1 Nr5a1 Nr5a1 ENSLCAP00010058865 ENSLCAP00010058865 LOC108902821 LOC108902821 etv4 etv4 meiob meiob
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Pou2f2POU domain protein. (616 aa)
ptger4G_PROTEIN_RECEP_F1_2 domain-containing protein. (450 aa)
ENSLCAP00010003883Notch 1a. (857 aa)
msx1Homeobox domain-containing protein. (284 aa)
sox2HMG box domain-containing protein. (322 aa)
ENSLCAP00010006659Lin-28 homolog A (C. elegans). (217 aa)
cenpnUncharacterized protein. (346 aa)
LOC108887913Uncharacterized protein; Belongs to the cytochrome P450 family. (521 aa)
wt1Uncharacterized protein. (481 aa)
pgrUncharacterized protein. (676 aa)
lef1HMG box domain-containing protein. (379 aa)
mcm3DNA helicase; Belongs to the MCM family. (815 aa)
CSDE1Uncharacterized protein. (913 aa)
cunh1orf53Uncharacterized protein. (478 aa)
mmp9Uncharacterized protein. (695 aa)
nr2f2Uncharacterized protein. (423 aa)
cdk2Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (298 aa)
hsd17b1Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (290 aa)
Smc5SMC_N domain-containing protein. (1093 aa)
YBX2CSD_1 domain-containing protein. (323 aa)
ubp1Uncharacterized protein. (542 aa)
gata4Uncharacterized protein. (392 aa)
CYP19A1Cytochrome P450 family 19 subfamily A member 1; Belongs to the cytochrome P450 family. (504 aa)
ENSLCAP00010020557ADAM metallopeptidase with thrombospondin type 1 motif, 9. (1877 aa)
SMARCE1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1. (431 aa)
arid3aUncharacterized protein. (553 aa)
ENSLCAP00010023131Testis expressed 30. (167 aa)
LOC108893819Uncharacterized protein. (940 aa)
traf4TNF receptor-associated factor. (470 aa)
tubTubby-like protein; Belongs to the TUB family. (502 aa)
gtf3aUncharacterized protein. (323 aa)
LOC108898497HMG box domain-containing protein. (478 aa)
ENSLCAP00010030391Zinc finger protein 706. (74 aa)
LHCGRLutropin-choriogonadotropic hormone receptor; Receptor for lutropin-choriogonadotropic hormone. The activity of this receptor is mediated by G proteins which activate adenylate cyclase; Belongs to the G-protein coupled receptor 1 family. FSH/LSH/TSH subfamily. (678 aa)
Dnd1DND microRNA-mediated repression inhibitor 1. (281 aa)
zar1zf-3CxxC domain-containing protein. (336 aa)
gdf9TGF_BETA_2 domain-containing protein. (435 aa)
Znf407Uncharacterized protein. (206 aa)
tcf21BHLH domain-containing protein. (176 aa)
dazlRRM domain-containing protein. (217 aa)
irx3Homeobox domain-containing protein. (454 aa)
LOC108875238Uncharacterized protein. (2519 aa)
LOC108880798Uncharacterized protein. (376 aa)
LOC108887630TGF_BETA_2 domain-containing protein. (400 aa)
BMPR2Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (511 aa)
cpeb1RRM domain-containing protein. (578 aa)
dll4Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (747 aa)
LOC108880438Uncharacterized protein. (530 aa)
LOC1088763284F5 domain-containing protein. (76 aa)
ENSLCAP00010043145Hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1; Belongs to the 3-beta-HSD family. (359 aa)
rad50Zinc-hook domain-containing protein. (1313 aa)
tnfaip6Uncharacterized protein. (263 aa)
LOC108895751Uncharacterized protein. (918 aa)
hsp90b1HATPase_c domain-containing protein. (798 aa)
cdk2-2Cyclin-dependent kinase 2. (298 aa)
osr2Uncharacterized protein. (273 aa)
cdk4Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (306 aa)
DLK1Delta like non-canonical Notch ligand 1. (293 aa)
inhaInhibin alpha chain; Inhibins and activins inhibit and activate, respectively, the secretion of follitropin by the pituitary gland. Inhibins/activins are involved in regulating a number of diverse functions such as hypothalamic and pituitary hormone secretion, gonadal hormone secretion, germ cell development and maturation, erythroid differentiation, insulin secretion, nerve cell survival, embryonic axial development or bone growth, depending on their subunit composition; Belongs to the TGF-beta family. (349 aa)
LOC108894392Lutropin-choriogonadotropic hormone receptor; Receptor for lutropin-choriogonadotropic hormone. The activity of this receptor is mediated by G proteins which activate adenylate cyclase; Belongs to the G-protein coupled receptor 1 family. FSH/LSH/TSH subfamily. (721 aa)
bub3WD_REPEATS_REGION domain-containing protein. (326 aa)
ACVR1BReceptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. (474 aa)
klf11Uncharacterized protein. (532 aa)
sox11Transcription factor SOX. (370 aa)
tfdp1Transcription factor. (413 aa)
nkx3-2Homeobox domain-containing protein. (265 aa)
bmp15TGF_BETA_2 domain-containing protein. (432 aa)
LOC108877344Uncharacterized protein. (2503 aa)
Cd247Uncharacterized protein. (164 aa)
sall4Uncharacterized protein. (1088 aa)
dnmt1DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (1511 aa)
Nr5a1Nuclear receptor subfamily 5, group A, member 1a. (486 aa)
ENSLCAP000100588655-aminolevulinate synthase. (578 aa)
LOC108902821Uncharacterized protein. (2495 aa)
etv4ETS domain-containing protein. (536 aa)
meiobUncharacterized protein. (460 aa)
Your Current Organism:
Lates calcarifer
NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.