STRINGSTRING
ENSLCAP00010040525 ENSLCAP00010040525 Gpx8 Gpx8 tmbim6 tmbim6 Scin Scin bax bax gpx7 gpx7 Gpx3 Gpx3 LOC108878964 LOC108878964 LOC108889988 LOC108889988 Pik3c3 Pik3c3 impdh1 impdh1 il10 il10 LOC108889258 LOC108889258 irf7 irf7 ENSLCAP00010037861 ENSLCAP00010037861 TLR2 TLR2 GPX2 GPX2 rpsa rpsa ENSLCAP00010043807 ENSLCAP00010043807 ENSLCAP00010045396 ENSLCAP00010045396 ENSLCAP00010045989 ENSLCAP00010045989 gsn gsn LOC108883701 LOC108883701 CASP3 CASP3 LOC108884442 LOC108884442 impdh2 impdh2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSLCAP00010040525Glutathione peroxidase; Belongs to the glutathione peroxidase family. (112 aa)
Gpx8Glutathione peroxidase; Belongs to the glutathione peroxidase family. (229 aa)
tmbim6Uncharacterized protein; Belongs to the BI1 family. (270 aa)
ScinScinderin. (763 aa)
baxUncharacterized protein. (192 aa)
gpx7Glutathione peroxidase; Belongs to the glutathione peroxidase family. (191 aa)
Gpx3Glutathione peroxidase; Belongs to the glutathione peroxidase family. (138 aa)
LOC108878964Uncharacterized protein. (763 aa)
LOC108889988Glutathione peroxidase; Belongs to the glutathione peroxidase family. (142 aa)
Pik3c3Phosphatidylinositol 3-kinase catalytic subunit type 3. (879 aa)
impdh1Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. (627 aa)
il10Uncharacterized protein. (187 aa)
LOC108889258Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. (669 aa)
irf7IRF tryptophan pentad repeat domain-containing protein. (441 aa)
ENSLCAP00010037861Caspase 3, apoptosis-related cysteine peptidase a; Belongs to the peptidase C14A family. (279 aa)
TLR2Toll like receptor 2. (689 aa)
GPX2Glutathione peroxidase; Belongs to the glutathione peroxidase family. (151 aa)
rpsa40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Belongs to the universal ribosomal protein uS2 family. (300 aa)
ENSLCAP00010043807Toll-like receptor 9; Belongs to the Toll-like receptor family. (1060 aa)
ENSLCAP00010045396Glutathione peroxidase; Belongs to the glutathione peroxidase family. (112 aa)
ENSLCAP00010045989Glutathione peroxidase; Belongs to the glutathione peroxidase family. (142 aa)
gsnUncharacterized protein. (790 aa)
LOC108883701Uncharacterized protein. (726 aa)
CASP3Caspase 3, apoptosis-related cysteine peptidase b; Belongs to the peptidase C14A family. (259 aa)
LOC108884442IRF tryptophan pentad repeat domain-containing protein. (466 aa)
impdh2Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. (560 aa)
Your Current Organism:
Lates calcarifer
NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.